Gene Information

Name : PputGB1_4486 (PputGB1_4486)
Accession : YP_001670708.1
Strain : Pseudomonas putida GB-1
Genome accession: NC_010322
Putative virulence/resistance : Virulence
Product : two component transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 5019807 - 5020490 bp
Length : 684 bp
Strand : -
Note : PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: pen:PSEEN4458 response regulator ColR

DNA sequence : 
ATGCGCATTCTTTTGGTTGAAGACAACCGCGATATCCTGGCCAACCTGGCCGATTACCTGGGCATGAAGGGTTACACCGT
CGACTGTGCCCAGGATGGCCTGTCCGGCCTGCACCTGGCCGCCACCGAACACTACGATTTGATCGTGCTCGACATCATGC
TGCCCGGCATCGATGGCTACACCCTGTGCAAGCGCCTGCGCGAAGACGCCCGCCGCGACACGCCGGTGATCATGCTCACC
GCCCGTGACCAGCTCGACGACCGCTTGCAAGGCTTCCGCTCAGGTGCCGATGACTACCTGCTCAAGCCGTTTGCCCTGTC
GGAGTTGGCGGCGCGCATCGAAGCGGTGCTGCGCCGTGCCCAGGGCGGCGGGCGCCGTACCCTGCAGGTGGCGGACCTCA
GCTACGACCTCGACACCCTCGAAGTTACCCGCCAGGGCCGCCTGCTCAAGCTCAACCCGGTCGGCCTCAAGCTGCTGGCG
GTGCTGATGCAAAAAAGCCCGCACGTCCTGCGCCGCGAGGTGCTGGAAGAAGCCCTGTGGGGCGACGACTGCCCCGACAG
CGACAGCTTGCGCAGCCATGTGCACCAGCTGCGCCAGGTGATCGACAAACCGTTTGAAAAACCGTTGTTGCATACCGTCC
ATGGCGTCGGCTATCGCCTCGCCGAGGGCCGCGATGGAGTTTAA

Protein sequence : 
MRILLVEDNRDILANLADYLGMKGYTVDCAQDGLSGLHLAATEHYDLIVLDIMLPGIDGYTLCKRLREDARRDTPVIMLT
ARDQLDDRLQGFRSGADDYLLKPFALSELAARIEAVLRRAQGGGRRTLQVADLSYDLDTLEVTRQGRLLKLNPVGLKLLA
VLMQKSPHVLRREVLEEALWGDDCPDSDSLRSHVHQLRQVIDKPFEKPLLHTVHGVGYRLAEGRDGV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 3e-33 42
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 3e-32 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PputGB1_4486 YP_001670708.1 two component transcriptional regulator BAC0197 Protein 2e-35 43
PputGB1_4486 YP_001670708.1 two component transcriptional regulator BAC0125 Protein 3e-34 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PputGB1_4486 YP_001670708.1 two component transcriptional regulator VFG0596 Protein 1e-33 42
PputGB1_4486 YP_001670708.1 two component transcriptional regulator VFG1390 Protein 3e-31 41