Gene Information

Name : PputGB1_3811 (PputGB1_3811)
Accession : YP_001670037.1
Strain : Pseudomonas putida GB-1
Genome accession: NC_010322
Putative virulence/resistance : Virulence
Product : siderophore biosynthesis protein
Function : -
COG functional category : J : Translation, ribosomal structure and biogenesis
COG ID : COG1670
EC number : -
Position : 4251302 - 4252315 bp
Length : 1014 bp
Strand : -
Note : KEGG: pen:PSEEN1813 siderophore biosynthesis protein

DNA sequence : 
ATGCCGTTCGATGCCGCTTCGCAGCCCCAGTCACCGCCACGTTGGCGCAGTCTCAGTGCCGAGGAGGGTGACCGCTGGCT
GAGCCTCACCCTTGAAGGCCGCCCGCTGATCCAAGTGCGCCTCGAGGCGGGCGCCACCCTGCACGTCCACCTTGATCGGC
TGTGCCCCGAGCGCCCGTATCAAGCCTTGTGGGCGGCCTGCTATTGGTTGCTGTCCCGCGACACGGCCTGCCAGCGCCTG
GTCTGGCATTTGCCCGAGGTGCAGCCCCAGGCGCTGGCCAGTGGCTTGCTGTTGCTGGCTGAGCAGCCCGGCCAGTACCT
GTGCGAGCGGGCGCTGTTCTGGCAGTTGCCACAGCCTTGGCTGGGTGAGTCGGTGGCAGCGGTGTACCCGCAGCAGATGC
AGATCAGCAATGGCAAGCGCCACCCGCGCCGCGCACCTAAGCCCCGTGGCGAGGTATACCGGCGCTTCGATGCACGCCTG
GGTAGCTGGGTGTCGCTGCGCACGCTGGAGATCGAACACGACCTGGAACGCTTCAACCGCTGGCAGAACAACCCGCGTGT
GGAGGCGTTCTGGCAGGAAGGTGGCACCCTTGCACAACATCATGAGTACCTGAGCAAGCTCGAAGCCGACCCGCATACCC
TGACGCTGATTGGCTGCTTCGATGATGAGCCGTTTGCCTACTTCGAGGCGTACTGGGCAAAGGAAGACCGCATTGCACCG
TTTTACCCGGTCGATGACTACGACCGTGGTATCCATATGCTGGTGGGGGAAGAGAGCCATCGAGGGCCGCACAAGGTGGC
CAGCTGGCTATCGGCGCTGGTGCACTACCTGTTCCTGGATGACCCGCGCACCCAGCGGGTGGTAGCCGAGCCGCGCGCAG
ACAACGGCAAGATGATCGGCTACATGCACGACCAGTGCTTCCATTGCGACAAGGCGTTCGACTTCCCGCACAAGCGGGCG
GCGCTGATGATTCTGGGGCGGGAGCGGTTTTTCGATCGTTGCAAGCTGGCTTGA

Protein sequence : 
MPFDAASQPQSPPRWRSLSAEEGDRWLSLTLEGRPLIQVRLEAGATLHVHLDRLCPERPYQALWAACYWLLSRDTACQRL
VWHLPEVQPQALASGLLLLAEQPGQYLCERALFWQLPQPWLGESVAAVYPQQMQISNGKRHPRRAPKPRGEVYRRFDARL
GSWVSLRTLEIEHDLERFNRWQNNPRVEAFWQEGGTLAQHHEYLSKLEADPHTLTLIGCFDDEPFAYFEAYWAKEDRIAP
FYPVDDYDRGIHMLVGEESHRGPHKVASWLSALVHYLFLDDPRTQRVVAEPRADNGKMIGYMHDQCFHCDKAFDFPHKRA
ALMILGRERFFDRCKLA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
iucB YP_002414045.1 aerobactin siderophore biosynthesis protein, N(6)-hydroxylysine acetylase Virulence Not named Protein 7e-50 44
iucB NP_839222.1 siderophore biosynthesis protein Virulence SHI-2 Protein 5e-50 44
iucB NP_709455.1 siderophore biosynthesis protein Virulence SHI-2 Protein 5e-50 44
iucB AAD44747.1 IucB Virulence SHI-2 Protein 3e-50 44
iucB AAK71632.1 IucB Virulence SHI-3 Protein 3e-50 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PputGB1_3811 YP_001670037.1 siderophore biosynthesis protein VFG1082 Protein 2e-50 44
PputGB1_3811 YP_001670037.1 siderophore biosynthesis protein VFG0939 Protein 3e-50 44
PputGB1_3811 YP_001670037.1 siderophore biosynthesis protein VFG0616 Protein 2e-50 44