Gene Information

Name : PputGB1_3792 (PputGB1_3792)
Accession : YP_001670018.1
Strain : Pseudomonas putida GB-1
Genome accession: NC_010322
Putative virulence/resistance : Virulence
Product : two component transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 4220457 - 4221140 bp
Length : 684 bp
Strand : -
Note : PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: pen:PSEEN3671 DNA-binding response regulator

DNA sequence : 
ATGCACGTTCTGCTCTGCGAGGACGACGACCTGATCGCCGCCGGTATCTGCGCCGGCCTTACCGCCCAGGGGCTGACCGT
GGACCGGGTGGGCAATGCCGCCGATGCGCGCGCGATGCTGCAGGCCGCGCAGTTCGACGTGATGATCCTCGACCTTGGCC
TGCCCGATGAAGACGGCCTGAAGCTGCTGCGCCGCCTACGCGAGAAGGGCGAAACGCTGCCAGTGCTGGTGCTCACCGCC
CGCGATGCCGTCACCGACCGGGTGGACGGCCTGCAGGCCGGCGCCGACGACTACCTGCTCAAGCCGTTCGACCTGCGCGA
GCTGGCTGCTCGCCTGCACACCCTGCTGCGGCGGGTGGCCGGGCGGGCGGTGAACGTGATCGAACACGGCCCGTTGCGTT
ACGACCCCAGCAGCTGCGAGGCGACCCTGGCCGGGCAGCCGGTCGACCTGTCCCGCCGCGAGCAGGCGTTGCTCCAGGCA
CTGCTGCAGAACCCCGGGCGGGTGCTGTCCAGCGAGCAGCTCAAAGACTGCGTGTACGGGTTCAGCGACGAAGTCGAAAG
CAATGCCCTGAACGTGCATATCCACCACCTGCGACGCAAGCTGGGTAACGGCATCGTCGAGACCGTGCGCGGCCTGGGCT
ACCGCCTGGGCCCGGCGCAGGCACCGCACGAGGCTGCATCATGA

Protein sequence : 
MHVLLCEDDDLIAAGICAGLTAQGLTVDRVGNAADARAMLQAAQFDVMILDLGLPDEDGLKLLRRLREKGETLPVLVLTA
RDAVTDRVDGLQAGADDYLLKPFDLRELAARLHTLLRRVAGRAVNVIEHGPLRYDPSSCEATLAGQPVDLSRREQALLQA
LLQNPGRVLSSEQLKDCVYGFSDEVESNALNVHIHHLRRKLGNGIVETVRGLGYRLGPAQAPHEAAS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
armR AAN62112.1 putative response-regulator ArmR Not tested PAGI-2(C) Protein 7e-49 56

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PputGB1_3792 YP_001670018.1 two component transcriptional regulator BAC0487 Protein 1e-26 43
PputGB1_3792 YP_001670018.1 two component transcriptional regulator CP000647.1.gene1136. Protein 2e-20 41
PputGB1_3792 YP_001670018.1 two component transcriptional regulator NC_002516.2.879194.p Protein 4e-24 41
PputGB1_3792 YP_001670018.1 two component transcriptional regulator BAC0530 Protein 2e-20 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PputGB1_3792 YP_001670018.1 two component transcriptional regulator VFG1389 Protein 4e-21 44
PputGB1_3792 YP_001670018.1 two component transcriptional regulator VFG0473 Protein 3e-30 43