|
Name : PputGB1_3732 (PputGB1_3732) Accession : YP_001669958.1 Strain : Pseudomonas putida GB-1 Genome accession: NC_010322 Putative virulence/resistance : Unknown Product : potassium-transporting ATPase subunit B Function : - COG functional category : P : Inorganic ion transport and metabolism COG ID : COG2216 EC number : - Position : 4153125 - 4155179 bp Length : 2055 bp Strand : - Note : One of the components of the high-affinity ATP-driven potassium transport (or KDP) system, which catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions DNA sequence : ATGAACATGCCCATTCCTGAAGTGAACACCCGGCACAGTGCCAAGGACCAGACCCGCTTCGCCGCGCTATGGCGCCCGGC GCTGGTGCAGGCATTCGTCAAGCTCGACCCGCGCCAGCTAAAACGTTCGCCGGTGATGCTGGTGGTGGCCCTGACTGCGG TGCTGACCACCGTGCTGTGCTTCGCCCCCGGTGGTGGCGTGAGTACTGGCGTTGCCGTGCAGATCGCCCTGTGGTTGTGG TTTACCGTGCTGTTCGCCAACTTCGCCGAAGCCCTCGCCGAAGGCCGGGGCAAGGCCCGCGCTGACAGCCTCAAGGCTGG CAGCCAAGGCCTGACCGCTCAGCGACGCCAGCGTGCTGGCAGCTTTGAGACGGTCGCTGCCAGCGCGCTGCGCAAGGACG ACGTGGTACGTGTGGTAGCCGGCGAGATGATCCCCGGTGACGGCGAAGTGCTTGAAGGCATCGCGGCCGTCAACGAGGCC GCCATTACCGGCGAGTCCGCGCCCGTGATCCGCGAATCCGGCGGCGACCGCTCGGCGGTGACCGGCAATACGCGGCTGGT CTCCGACTGGCTGCTGATTCGCATCACCAGCAACCCGGGCGAGTCGACCCTGGACCGCATGATCGCCCTGGTCGAAGGCG CCAAGCGGCAGAAGACCCCGAACGAAATCGCCCTCGACATCCTGCTGATCGGCCTGACCCTGATCTTCCTGATCGTAGTG GTGACCTTGCAGCCGTTCGCTCACTTCGTGGGTGGCAGCCTGCCGCTGATCTTCCTGGCCGCGCTGCTGGTGACGCTGAT CCCCACCACCATCGGCGGCCTGCTATCGGCCATCGGCATCGCCGGCATGGACCGGCTGGTGCGGCTGAACGTCATCGCCC GCTCGGGCCGCGCGGTCGAGGCGGCCGGTGACGTGCACACGCTGATGCTCGACAAGACCGGCACCATCACCTTCGGCAAC CGCCGCTGCAGCGCGTTGCATGCTGCACCGGGCATTACCGCCCGCGAGCTGGGGGAGGGCGCTTTGCTGGCCTCGCTGGC CGACGACACTGCCGAAGGCAAGTCGATTGTCGAATACCTGCGCCAGTTGCATGACTTTGTCGAACCGCCTGCCGGGCAGT TCGAAGCCGTGGCCTTCAGTGCCGAGACCCGCCTGTCGGGCATCGACTTCCAGCAGCATCGCTACCGCAAGGGCGCCGTC GATGCGGTGCTGGCATTCGTTGGCATGCAACGCCTGGAAATGCCCCCGGCGTTGGCCCGCGAAGTGGAGCGCATCGCCCA AAGCGGCGGTACGCCATTGCTGGTGTGCATCGATAAACGCCTGCTGGGTGTCATTCACCTCAAGGACGTGGTCAAGCCTG GTATCCGCGAGCGCTTCGCCGAGCTGCGCAAGCTGGGCATTCGCACGGTGATGGTGACCGGCGACAACCCGCTGACCGCC GCAGCCATCGCCGCCGAAGCGGGGGTGGATGATGTGTTGGCCGAGGCCACGCCCGAGAAGAAGCTGGCGCGCATTCGCCA GGAGCAGAATGACGGCCGCCTGGTGGCCATGTGCGGTGACGGCGCCAACGACGCCCCGGCACTGGCCCAGGCTGATGTCG GCATGGCCATGAACGATGGCACCCAGGCCGCGCGTGAGGCGGCGAACATGGTCGACCTGGACAGCGACCCGACCAAGCTG CTGGACGTGGTGCAGGTTGGCAAGGAGTTGCTGGTCACCCGTGGTGCGTTGACCACGTTCTCCATTGCCAACGACGTGGC CAAGTACTTCGCCATCCTACCGGCGCTGTTCGCTGCCATTTACCCACAGCTGGGCGTGCTCAACCTGATGCACCTGGCCA GCCCGCAGAGCGCGATCCTGTCGGCCATCGTGTTCAACGCGCTGATCATCATCGTGCTGATTCCACTGGCGCTGCGAGGT GTGCGGGTGCAGGCCGCCAGTGCGGCGCACCTGCTGCGGCGCAACCTGCTGGTCTACGGGCTGGGCGGCATCGTGGTGCC GTTTGCCGGCATCAAGCTGATCGACCTGCTGCTCAATGCACTGAACCTGGTCTGA Protein sequence : MNMPIPEVNTRHSAKDQTRFAALWRPALVQAFVKLDPRQLKRSPVMLVVALTAVLTTVLCFAPGGGVSTGVAVQIALWLW FTVLFANFAEALAEGRGKARADSLKAGSQGLTAQRRQRAGSFETVAASALRKDDVVRVVAGEMIPGDGEVLEGIAAVNEA AITGESAPVIRESGGDRSAVTGNTRLVSDWLLIRITSNPGESTLDRMIALVEGAKRQKTPNEIALDILLIGLTLIFLIVV VTLQPFAHFVGGSLPLIFLAALLVTLIPTTIGGLLSAIGIAGMDRLVRLNVIARSGRAVEAAGDVHTLMLDKTGTITFGN RRCSALHAAPGITARELGEGALLASLADDTAEGKSIVEYLRQLHDFVEPPAGQFEAVAFSAETRLSGIDFQQHRYRKGAV DAVLAFVGMQRLEMPPALAREVERIAQSGGTPLLVCIDKRLLGVIHLKDVVKPGIRERFAELRKLGIRTVMVTGDNPLTA AAIAAEAGVDDVLAEATPEKKLARIRQEQNDGRLVAMCGDGANDAPALAQADVGMAMNDGTQAAREAANMVDLDSDPTKL LDVVQVGKELLVTRGALTTFSIANDVAKYFAILPALFAAIYPQLGVLNLMHLASPQSAILSAIVFNALIIIVLIPLALRG VRVQAASAAHLLRRNLLVYGLGGIVVPFAGIKLIDLLLNALNLV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ef0088 | AAM75291.1 | EF0088 | Not tested | Not named | Protein | 1e-142 | 58 |
| kdpB | NP_814334.1 | potassium-transporting ATPase subunit B | Not tested | Not named | Protein | 2e-142 | 58 |
| kdpB | YP_251949.1 | potassium-transporting ATPase subunit B | Not tested | SCCmec | Protein | 2e-119 | 57 |
| SAR0071 | YP_039539.1 | potassium-transporting ATPase subunit B | Not tested | Type-II SCCmec | Protein | 1e-119 | 57 |
| kdpB(SCCmec) | NP_370597.1 | potassium-transporting ATPase subunit B | Not tested | Type-II SCCmec | Protein | 1e-119 | 57 |
| kdpB | NP_373310.1 | potassium-transporting ATPase subunit B | Not tested | Type-II SCCmec | Protein | 1e-119 | 57 |
| kdpB | YP_190029.1 | potassium-transporting ATPase subunit B | Not tested | Type-II SCCmec | Protein | 1e-119 | 57 |
| kdpB | BAA82181.1 | potassium-transporting ATPase(B chanin) | Not tested | Type-II SCCmec | Protein | 1e-119 | 57 |
