Gene Information

Name : PputGB1_3722 (PputGB1_3722)
Accession : YP_001669948.1
Strain : Pseudomonas putida GB-1
Genome accession: NC_010322
Putative virulence/resistance : Unknown
Product : ABC transporter-like protein
Function : -
COG functional category : R : General function prediction only
COG ID : COG4172
EC number : -
Position : 4139007 - 4140614 bp
Length : 1608 bp
Strand : +
Note : PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; KEGG: pen:PSEEN3568 ABC transporter, ATP-binding protein

DNA sequence :
ATGAGTGAACAGAACCTGATCGAAGTGCGCGATCTGGCGGTGGAGTTTGTCACCGGCGACCAGGTCAACCGGGTGGTGGA
CGGCATCAGCTTCGACATCCGCAAGGGCGAGACACTGGCCCTGGTGGGCGAGAGTGGCTCGGGCAAATCGGTCACCGCGC
ACTCGATCCTGCGCCTGCTGCCCTACCCGCTGGCCCGTCACCCCAGCGGCAGCATCCGCTACGAGGGCAAGGACCTGCTG
CAGCAAAACGAGAAGACCCTGCAGCGCATTCGCGGCAACCGCATTGCGATGATCTTCCAAGAGCCGATGACCTCGCTGAA
CCCGCTGCATTGCATCGAGAAGCAGATCAACGAAATCCTCCTGCTGCACAAGGGCCTGACCGGCAAGGAAGCGACTGCCC
GCACCCTGGAGCTGCTGGAGCTGGTCGGCATCCCCGAGCCGCGCAAGCGCCTCAAGGCCCTGCCCCACGAACTGTCTGGC
GGGCAGCGCCAGCGAGTGATGATTGCCATGGCGTTGGCCAACGAGCCAGAGCTGCTGATTGCCGACGAACCGACCACGGC
GCTGGATGTGACCGTGCAGTTGAAGATTCTCGACCTGCTCAAGGAACTGCAGGCACGCCTGGGCATGGCGCTGCTACTGA
TCAGCCATGACCTGAACCTGGTACGCCGCATCGCCCACCGCGTGTGCGTGATGCAGCGCGGGCAGATCGTGGAACAGGCT
GAATGCGCCACACTGTTCAGCGCCCCGCAGCACCACTACACGCAGATGCTGATCAATGCCGAGCCCAGCGGGCTGCCAGC
GCACAACCCGGTCGGGGCGCCGCTGCTGGAGGTGGATGACCTCAAGGTATGGTTCCCGATCAAAAAGGGCTTTTTGCGGC
GTACGGTCGACCATGTGAAGGCGGTGGACGGGGTCAACTTCAGCTTGCCGCAGGGGCAGACACTGGGCATTGTCGGCGAG
TCCGGGTCGGGCAAGTCCACGTTGGGCCTGGCGATCTTGCGGCTGATTTCCAGCCAGGGCGGCATTCGCTTCCATGGGCA
GAACCTCGAAGGGCTGAACCAGAAAGCCGTGCGCCCGCTGCGGCGTGAGATGCAGGTGGTGTTCCAGGACCCATTCGGCA
GCCTTAGCCCGCGCATGTGCGTGGCGGACATTGTCGGTGAAGGGCTGCGCATTCACGGTATTGGCAACGCGCAGGAACAG
GAAACGGCGATTATTGCGGCGCTGGAGGAAGTGGGGCTAGACCCAAGGACTCGGCATCGCTACCCGCATGAGTTTTCCGG
TGGGCAGCGCCAGCGTATTGCCATTGCCCGGGCGCTGGTGTTGAAGCCGGCGCTGATTCTGCTGGATGAGCCTACCTCCG
CGCTGGACCGCACGGTGCAGCGGCAGGTGGTGGAGCTACTACGCAATCTGCAGCAGAAGTACAACCTGACGTACCTGTTC
ATCAGCCATGACCTGGCGGTGGTGAAGGCGCTGAGCCACCAGTTGATGGTGATCAAACATGGGCATGTTGTTGAACAAGG
TGATGCGCAGGCGATATTCCATGCGCCGCAACATCCGTATACGCGGCAGCTGCTGGAAGCGGCGTTCCTGGAGGTTGAGG
CTTCGTAG

Protein sequence :
MSEQNLIEVRDLAVEFVTGDQVNRVVDGISFDIRKGETLALVGESGSGKSVTAHSILRLLPYPLARHPSGSIRYEGKDLL
QQNEKTLQRIRGNRIAMIFQEPMTSLNPLHCIEKQINEILLLHKGLTGKEATARTLELLELVGIPEPRKRLKALPHELSG
GQRQRVMIAMALANEPELLIADEPTTALDVTVQLKILDLLKELQARLGMALLLISHDLNLVRRIAHRVCVMQRGQIVEQA
ECATLFSAPQHHYTQMLINAEPSGLPAHNPVGAPLLEVDDLKVWFPIKKGFLRRTVDHVKAVDGVNFSLPQGQTLGIVGE
SGSGKSTLGLAILRLISSQGGIRFHGQNLEGLNQKAVRPLRREMQVVFQDPFGSLSPRMCVADIVGEGLRIHGIGNAQEQ
ETAIIAALEEVGLDPRTRHRYPHEFSGGQRQRIAIARALVLKPALILLDEPTSALDRTVQRQVVELLRNLQQKYNLTYLF
ISHDLAVVKALSHQLMVIKHGHVVEQGDAQAIFHAPQHPYTRQLLEAAFLEVEAS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
oppDF2 YP_005681814.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 4e-79 43
oppDF2 YP_005683914.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 4e-79 43
cpfrc_01561 YP_003783961.1 hypothetical protein Not tested PiCp 6 Protein 4e-79 43
oppDF2 YP_005686002.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 4e-79 43
dppD YP_005160017.1 putative peptide ABC transport system ATP-binding protein Not tested Not named Protein 9e-99 42