Gene Information

Name : PputGB1_3494 (PputGB1_3494)
Accession : YP_001669721.1
Strain : Pseudomonas putida GB-1
Genome accession: NC_010322
Putative virulence/resistance : Resistance
Product : MarR family transcriptional regulator
Function : -
COG functional category : K : Transcription
COG ID : COG1846
EC number : -
Position : 3899112 - 3899534 bp
Length : 423 bp
Strand : -
Note : TIGRFAM: homoprotocatechuate degradation operon regulator, HpaR; PFAM: regulatory protein MarR; KEGG: pen:PSEEN3090 homoprotocatechuate degradative operon repressor

DNA sequence :
ATGACCAAGACCCAACCTTCGCTCACCCTAAGCCTTTTGCAGGCCCGAGAAGCCGCGATGGCATTTTTCAGGCCGCTGTT
GAACGCGCATGACCTGACCGAGCAGCAATGGCGGGTCATCCGCATCCTCAAGCAGCATGGCGAGCTGGAGAATTACCAGC
TGGCAGAACTGGCCTGCATCCTCAAGCCGAGCATGACCGGGGTGCTGGGGCGGCTGGAGCGCGATGGGCTGGTGCGGCGG
CAGAAGGCAGCGCAGGACCAGCGGCGGGTGTTCGTCAGCCTGACCGAAGACGGGGAGGCGTGCTTTGCCTCGATGAAGGA
AGGGATGGAGGCCAACTACCAGAAGATTCAGGCGCAGTTTGGTGAAGAGAAGCTGCAGCAACTGATGGGCTTGTTGAATG
ACCTGAAGCGCATTTCGCCCTGA

Protein sequence :
MTKTQPSLTLSLLQAREAAMAFFRPLLNAHDLTEQQWRVIRILKQHGELENYQLAELACILKPSMTGVLGRLERDGLVRR
QKAAQDQRRVFVSLTEDGEACFASMKEGMEANYQKIQAQFGEEKLQQLMGLLNDLKRISP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hpcR AAO17176.1 HpcR Not tested tcd island Protein 4e-34 52

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PputGB1_3494 YP_001669721.1 MarR family transcriptional regulator BAC0505 Protein 5e-28 48