Gene Information

Name : PputGB1_3264 (PputGB1_3264)
Accession : YP_001669492.1
Strain : Pseudomonas putida GB-1
Genome accession: NC_010322
Putative virulence/resistance : Unknown
Product : short-chain dehydrogenase/reductase SDR
Function : -
COG functional category : R : General function prediction only
COG ID : COG4221
EC number : -
Position : 3663046 - 3663777 bp
Length : 732 bp
Strand : -
Note : PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: pfo:Pfl_4325 short-chain dehydrogenase/reductase SDR

DNA sequence :
ATGACCAACACCCATAAACCGCTGGTGGTAATTACCGGTGCCAGCTCCGGCATTGGCCTGGCCACCGCCAAGCTGCTGTC
CAGCCGCGGCCATGCACTGTTGCTGCTGTCTCGCCGCCTGGCGCCGATGCAACAACTGCAGTTGCCCAACACGCTGGCGC
TGCCGGTCGATGTGACTGACCGCGCGGCTGTGCTGGCTGCCGTTGCCGAGGCCGAGGCACGCTTTGGCCCGGTCGACGCG
ATCATCAACAATGCCGGTGTAATGCTGCTGGGCGCAATCGCCACGCAGGACCCAGAGCAGTGGGACCGCATGCTCGACGT
GAACGTGCGTGGGCTGCTCAACGGCATCCATGCCGTGGCCGGCGGCATGGTCGAGCGCAAGCACGGCACCATCATCAACG
TCAGCTCCGTGGCCGGGCGCAAGGCCTTCCCCAACCATGTCGCCTATGTCGGTACCAAGTTCGCCGTTACAGGCCTGTCG
GAAAACCTGCGCGAAGAACTGGCACCGAGTAACGTGCGGGTGATCACCATCGAGCCGGGCGCTGTCGACACCGAACTGCT
CAGCCACACGACCGATGACGCCATCAAGGCGGGCTACAACGACTGGAAGCAGGAAATGGGCGGGGTGCTGACGGCGCAGA
CCATTGCCGAGACCATCGGCTTTGCCTATGGCCAACCGCAATCGGTGTGCATTCGCGAAATTGTGGTGTGCGCTACCCGT
CAGCAGCAATAA

Protein sequence :
MTNTHKPLVVITGASSGIGLATAKLLSSRGHALLLLSRRLAPMQQLQLPNTLALPVDVTDRAAVLAAVAEAEARFGPVDA
IINNAGVMLLGAIATQDPEQWDRMLDVNVRGLLNGIHAVAGGMVERKHGTIINVSSVAGRKAFPNHVAYVGTKFAVTGLS
ENLREELAPSNVRVITIEPGAVDTELLSHTTDDAIKAGYNDWKQEMGGVLTAQTIAETIGFAYGQPQSVCIREIVVCATR
QQQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAC20627.1 hypothetical protein Not tested Internalin Protein 2e-23 41