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Name : PputGB1_3231 (PputGB1_3231) Accession : YP_001669459.1 Strain : Pseudomonas putida GB-1 Genome accession: NC_010322 Putative virulence/resistance : Virulence Product : type VI secretion protein Function : - COG functional category : S : Function unknown COG ID : COG3522 EC number : - Position : 3619145 - 3620482 bp Length : 1338 bp Strand : + Note : TIGRFAM: type VI secretion protein, VC_A0114 family; PFAM: protein of unknown function DUF876; KEGG: eca:ECA3438 hypothetical protein DNA sequence : ATGAGTTCACGCAACCCCGTCCTTTGGCCCGAAGGCCTGTTCGTAAAACCACAGCATTTCCAACAGGCGGCCAGGGCCAG TGAAGCAGCCCTGCACCAGCGCCTCGCCAGCCTCAATGCAGCGTTCTATGGCTTCAGCGAAATACAGTTGAACGACGAGT ACCTGAGCCTTGGCAAGATAGCCATCACTCGGGCGCGAGGCGTCATGCCGGACGGCACGGTATTCGACATTCCCGCCGAC CTGCCACCACCACCGCCACTGGAAATCGGCGACGACGCTTGCAAGGACAGCGAGGTGTATCTGTGCCTGCCGCTGCGAAC CGATGGGGGGCGCGAAGTGAGCTGGCCCGACAATGCTGCTAACTTCCGCTATACCGCCCAGGCACAGGAAATCAAGGATA CCCACACCGCCGATGGCGACCTGGTAAACGTAGACCTTGCCGTGCCCAACCTGCAGCTCAAGCGCAAGGCCCAGGACAGT AGCGCCTACACTCGCCTGGCACTGGCACGCATCCTGGAACGGCGCCCCGATGGCAGCCTGCAGCTGGACGAAGCGTTCTA CCCTACCAGCGTGTCAGTGCGGGCGATACCAGCACTGCAGCGGTTCCTGGACGAAATCACCAACACACTGCGCGAGCGCG CGCGGGGACTTGCCACACGCATTGGCGCATCGGGCCAATCCGGTATCGCCGATATCCGCGACTTCAACCTGCTGCAGGCC ATGAACCGTTGGTGGCCATGCTTTCAGCACCTGGCCAGGCAAGCGCAAACGCACCCCGAGCAGCTGTACCTGAGCATGAG CCAGGCCTGCGGCGAATTCGTCACTTTCACCGACGAAAACAGACTGCCGCAGGAGTACCCGGCGTATCACCACACTGCAC TGCACACCTCTTTCAAACCGCTGGAAAACACCTTGCGCCGATCCCTGAGCACGGTCCTGCGGCCACGCGCCGTGTCGCTA CCGTTGGAGGGCGAAGCATTCGGCGTGATGACAACCACGCTAGAGGACCGTCGCCTAATCGACGAAGCCGACTTCATCCT CGCCGTGCGCGCCGACCTGCCGCCACAGGCTTTGCGCCAGATGTTCATCCAGAAAGCCAAGATTACTTCACTTGAGTCAT TGATCGACCTGGTGCCGCTACAACTGCCGGGCATCCCTTTGCGACCACTGCCGGTGGCCCCGCGTGACCTGCCCTTCCAT GCAGGTTTCAGCTACTTCGAGTTGGACCGGCGTGACCCGACCTGGGCATGCATGGCCAAGGCAAATGGCTTCGGTATCCA CATCGCGGGCGAGTTCCCAGGACTTGAGCTGCAGTTCTGGGCGATCAGGAGTGAGTGA Protein sequence : MSSRNPVLWPEGLFVKPQHFQQAARASEAALHQRLASLNAAFYGFSEIQLNDEYLSLGKIAITRARGVMPDGTVFDIPAD LPPPPPLEIGDDACKDSEVYLCLPLRTDGGREVSWPDNAANFRYTAQAQEIKDTHTADGDLVNVDLAVPNLQLKRKAQDS SAYTRLALARILERRPDGSLQLDEAFYPTSVSVRAIPALQRFLDEITNTLRERARGLATRIGASGQSGIADIRDFNLLQA MNRWWPCFQHLARQAQTHPEQLYLSMSQACGEFVTFTDENRLPQEYPAYHHTALHTSFKPLENTLRRSLSTVLRPRAVSL PLEGEAFGVMTTTLEDRRLIDEADFILAVRADLPPQALRQMFIQKAKITSLESLIDLVPLQLPGIPLRPLPVAPRDLPFH AGFSYFELDRRDPTWACMAKANGFGIHIAGEFPGLELQFWAIRSE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| aec25 | YP_851420.1 | hypothetical protein | Not tested | PAI II APEC-O1 | Protein | 1e-72 | 41 |
| aec25 | AAQ96719.1 | Aec25 | Not tested | AGI-1 | Protein | 8e-73 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| PputGB1_3231 | YP_001669459.1 | type VI secretion protein | VFG2082 | Protein | 6e-108 | 49 |
| PputGB1_3231 | YP_001669459.1 | type VI secretion protein | VFG2065 | Protein | 2e-86 | 45 |
