Gene Information

Name : PputGB1_3123 (PputGB1_3123)
Accession : YP_001669351.1
Strain : Pseudomonas putida GB-1
Genome accession: NC_010322
Putative virulence/resistance : Virulence
Product : aldehyde dehydrogenase
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG1012
EC number : -
Position : 3497260 - 3498780 bp
Length : 1521 bp
Strand : -
Note : PFAM: Aldehyde Dehydrogenase; KEGG: pfl:PFL_2222 aldehyde dehydrogenase

DNA sequence : 
ATGATCTACGCACAACCCGGAACTCCAGGTGCCGTCGTGTCCTTCAAACCACGCTACGGCAACTTCATCAATGGCGAGTT
CGTGCCGCCGCTGGCTGGCCAATACTTCACCAACAGTTCGCCGGTCAATGGCCAGCCGATTGCCGAATTCCCGCGCTCCA
CTGCCCAGGACATCGACCGCGCCCTGGACGCCGCGCATGCCGCCGCTCAAGCCTGGGGCAAGACCTCGGTGCAAGACCGC
GCCCTGATGCTGCTGAAAATCGCCGACCGCATCGAACAGAACCTGGAAGTGCTGGCCGTCACCGAAAGCTGGGACAACGG
CAAGGCCGTGCGCGAAACCTTGAATGCCGACGTGCCGCTGGCGGCGGACCACTTCCGTTACTTCGCCGGTTGCATCCGTG
CCCAGGAAGGTGGTGCCGCCGAGATCAACGAAGGCACCGTGGCCTATCACATCCATGAGCCGTTGGGCGTGGTCGGGCAG
ATCATCCCGTGGAACTTCCCGCTGCTGATGGCCGCCTGGAAGCTTGCCCCGGCGCTGGCCGCCGGCAACTGCGTGGTGCT
CAAGCCGGCTGAGCAAACGCCCCTGTCGATCACCATTTTCGCCGAGCTGATCGCCGATTTGTTACCGGCCGGTGTGCTGA
ACATCGTCCAGGGCTTTGGCCGCGAGGCTGGCGAGGCCCTGGCTACCAGCAAGCGCATTGCCAAGATCGCCTTCACCGGC
TCCACCCCGGTGGGTTCGCACATCATGAAGTGCGCGGCCGAGAACATCATCCCGTCCACCGTCGAGCTGGGCGGCAAGTC
GCCGAACATCTTCTTCGAAGACATCATGCAGGCCGAGCCCGCGTTCATCGAAAAGGCCGCCGAAGGCCTGGTGCTGGCGT
TCTTCAACCAGGGCGAGGTATGCACCTGCCCGTCGCGGGCGCTGATCCAGGAATCGATCTACGAGCCGTTCATGGCCGAG
GTGATGAAGAAAATCGCCAAGATCACACGTGGCAACCCGCTGGATACCGAGACCATGGTCGGTGCCCAGGCTTCCGAGCA
ACAGTACGACAAGATCCTTTCGTACCTGCAGGTTGCCAAGGAGGAGGGCGCGCAGCTGCTGACTGGCGGCAGTGCCGAGC
GGCTGCAGGGCGACCTGGCAAGCGGTTACTACATCCAGCCGACCCTGTTGAAGGGCAACAACACGATGCGCGTGTTCCAG
GAAGAAATCTTCGGCCCGGTGGTGGGCGTGACCACCTTCAAGGACGAAGCTGAAGCGCTGGCGATCGCCAACGACACCGA
ATTCGGCCTGGGCGCCGGCCTGTGGACCCGCGACATCAACCGCGCCTACCGCATGGGCCGGGGGATCAAGGCCGGGCGGG
TATGGACCAACTGCTATCACCTGTATCCGGCGCATGCAGCGTTTGGTGGCTACAAGAAGTCGGGTGTTGGCCGTGAGACC
CACAAGATGATGCTCGACCATTATCAGCAGACCAAGAACCTGCTGGTGAGCTACGACATCAACCCGTTGGGCTTCTTCTA
A

Protein sequence : 
MIYAQPGTPGAVVSFKPRYGNFINGEFVPPLAGQYFTNSSPVNGQPIAEFPRSTAQDIDRALDAAHAAAQAWGKTSVQDR
ALMLLKIADRIEQNLEVLAVTESWDNGKAVRETLNADVPLAADHFRYFAGCIRAQEGGAAEINEGTVAYHIHEPLGVVGQ
IIPWNFPLLMAAWKLAPALAAGNCVVLKPAEQTPLSITIFAELIADLLPAGVLNIVQGFGREAGEALATSKRIAKIAFTG
STPVGSHIMKCAAENIIPSTVELGGKSPNIFFEDIMQAEPAFIEKAAEGLVLAFFNQGEVCTCPSRALIQESIYEPFMAE
VMKKIAKITRGNPLDTETMVGAQASEQQYDKILSYLQVAKEEGAQLLTGGSAERLQGDLASGYYIQPTLLKGNNTMRVFQ
EEIFGPVVGVTTFKDEAEALAIANDTEFGLGAGLWTRDINRAYRMGRGIKAGRVWTNCYHLYPAHAAFGGYKKSGVGRET
HKMMLDHYQQTKNLLVSYDINPLGFF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC0819 NP_230467.2 aldehyde dehydrogenase Not tested VPI-1 Protein 1e-149 66
aldA AAK20747.1 aldehyde dehydrogenase Virulence VPI Protein 2e-156 64
aldA AAK20776.1 aldehyde dehydrogenase Virulence VPI Protein 2e-156 64
aldA AAC12273.1 aldehyde dehydrogenase Virulence VPI Protein 2e-156 64
aldA-1 YP_001216300.1 aldehyde dehydrogenase Not tested VPI-1 Protein 1e-155 64

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PputGB1_3123 YP_001669351.1 aldehyde dehydrogenase VFG0082 Protein 5e-150 66