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Name : PputGB1_3078 (PputGB1_3078) Accession : YP_001669306.1 Strain : Pseudomonas putida GB-1 Genome accession: NC_010322 Putative virulence/resistance : Resistance Product : arsenical pump membrane protein Function : - COG functional category : P : Inorganic ion transport and metabolism COG ID : COG1055 EC number : - Position : 3443255 - 3444538 bp Length : 1284 bp Strand : + Note : TIGRFAM: arsenical pump membrane protein; PFAM: Arsenical pump membrane protein; Citrate transporter; KEGG: pen:PSEEN3307 arsenite efflux pump DNA sequence : ATGCTGGTCGCCATTGCTGTCTTCGTCCTCACCCTCACCCTCGTCATCTGGCAGCCAAAGGGGCTTGGCGTCGGCTGGAG TGCCGCGCTGGGTGCCGTCATTGCCTTGCTGGCTGGCGCGGTTTCCCTGCACGATATCCCCACCGTGTGGGCCATTGTCT GGAACGCTACCGCCACCTTCATCGCCGTCATCATCATCAGCCTGCTGCTCGATGAAGCCGGCTTCTTCGAATGGGCCGCG CTGCACGTTGCGCGCTGGGCAAACGGCAGCGGCTATCGCCTGTTCGCCTTCAGCGTGTTGCTCGGCGCCGCCGTGTCGGC GCTGTTTGCCAACGATGGCGCGGCGCTGATTCTTACGCCAATCGTCATGTCGATGCTGCTCGCATTGCGCTTCTCGCCTG CTGCGACACTGGCCTTTGTCATGGCTGCGGGCTTTATTGCCGACACGGCGAGCCTGCCGCTGGTGGTCTCCAACCTGGTC AACATCGTCTCGGCCGATTACTTCGGCCTGGGTTTCACCGAATATGCCTCGGTAATGGTGCCGGTGAATATCGCCAGCGT GGCAGCCACCCTGGTGGTGCTTTATCTGTTTTTCCGCCGTGACATCCCAAGGCGGTATGCACTCGATGCGCTGAAGAAAC CGAGCGAGGCGATTGTCGACCGCGCCACCTTCAAAGTCGGAATGTGGGTACTGGTGGCACTGCTTACAGGCCTGTTTGCC TTGGAGCCGTTGGGTATCCCGATCAGTGCGGTGGCCGCAGCCTGTGCCGCCGCTCTGTTCGCCGTCGCTGCTTACGGTCA CCGTATTTCAACGCGTCGCGTGCTGCGAGAGGCCCCGTGGCAGGTGGTGATCTTCTCGCTCGGGATGTATCTGGTGGTGT ATGGCCTGAAAAACGCCGGCCTCACCGACATGCTCACTCACCTGCTCGACCGGCTTGCGCAACAAGGCCTATGGAGTGCT GCCATCGGCACCGGCCTTGTTTCGGCGCTGCTGTCCTCGGTGATGAACAACATGCCCAGCGTTCTGGTCGGCGCCTTGTC GATCCAGGCCAGCGGCGCAGAGGGCCTGATACGTGAGGCGATGATCTACGCCAACGTCATCGGCTGCAACCTCGGTCCGA AAATCACCCCGATAGGCAGCCTCGCCACGCTGCTTTGGCTGCATGTGCTGGAGCGCAAAGGCATGCGCATCACCTGGGGT TACTACTTTGGTGTCGGCCTCCTGCTGACCCTGCCGGTTTTGCTGATCACCCTCTCGGCCCTGGCACTGCGCCTGAGCCT CTGA Protein sequence : MLVAIAVFVLTLTLVIWQPKGLGVGWSAALGAVIALLAGAVSLHDIPTVWAIVWNATATFIAVIIISLLLDEAGFFEWAA LHVARWANGSGYRLFAFSVLLGAAVSALFANDGAALILTPIVMSMLLALRFSPAATLAFVMAAGFIADTASLPLVVSNLV NIVSADYFGLGFTEYASVMVPVNIASVAATLVVLYLFFRRDIPRRYALDALKKPSEAIVDRATFKVGMWVLVALLTGLFA LEPLGIPISAVAAACAAALFAVAAYGHRISTRRVLREAPWQVVIFSLGMYLVVYGLKNAGLTDMLTHLLDRLAQQGLWSA AIGTGLVSALLSSVMNNMPSVLVGALSIQASGAEGLIREAMIYANVIGCNLGPKITPIGSLATLLWLHVLERKGMRITWG YYFGVGLLLTLPVLLITLSALALRLSL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| arsB2 | YP_001007633.1 | arsenical pump membrane protein | Not tested | YAPI | Protein | 2e-127 | 74 |
| arsB | YP_005754065.1 | arsenical pump membrane protein | Not tested | Type-XI SCCmec | Protein | 7e-93 | 55 |
| arsB | YP_252017.1 | arsenical pump membrane protein | Not tested | SCCmec | Protein | 3e-95 | 55 |
| SH0109 | YP_252024.1 | arsenical pump membrane protein | Not tested | SCCmec | Protein | 1e-95 | 54 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| PputGB1_3078 | YP_001669306.1 | arsenical pump membrane protein | BAC0576 | Protein | 1e-127 | 75 |
| PputGB1_3078 | YP_001669306.1 | arsenical pump membrane protein | BAC0578 | Protein | 7e-128 | 75 |
| PputGB1_3078 | YP_001669306.1 | arsenical pump membrane protein | BAC0031 | Protein | 3e-124 | 74 |
| PputGB1_3078 | YP_001669306.1 | arsenical pump membrane protein | BAC0577 | Protein | 4e-123 | 72 |
| PputGB1_3078 | YP_001669306.1 | arsenical pump membrane protein | BAC0574 | Protein | 3e-95 | 55 |
| PputGB1_3078 | YP_001669306.1 | arsenical pump membrane protein | BAC0575 | Protein | 8e-95 | 54 |
