Gene Information

Name : PputGB1_2876 (PputGB1_2876)
Accession : YP_001669106.1
Strain : Pseudomonas putida GB-1
Genome accession: NC_010322
Putative virulence/resistance : Virulence
Product : two component transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 3228701 - 3229381 bp
Length : 681 bp
Strand : +
Note : PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: pen:PSEEN2089 DNA-binding response regulator

DNA sequence : 
ATGCCTCGCGTACTGACCATCGAAGACGACGCCGTCACCGGCCAGGAAATCGTCGCCGAACTTACCAGCCACGGCCTGGA
GGTGGATTGGGCCGACAACGGCCGTGAGGGCCTGGCCAAGGCCATTGCCGGCGGCTACGACCTGATCACCCTGGACCGCA
TGCTGCCCGAGGTCGATGGCCTGACCATCGTCACCACCCTGCGCAGCCTCAAGATCGCCACGCCGATCCTGATGATCAGC
GCCCTCTCCGACGTCGATGAGCGGGTGCGCGGCCTGCGTGCCGGCGGTGACGACTACCTGACCAAACCGTTCGCCTCCGA
CGAGATGGCCGCGCGGGTCGAGGTGTTGCTGCGCCGCAACAGCGTGCCCATGACCCAGACCCGCCTGCAGGTCGCCGACC
TGCAACTGGACCTGATCAGCCACGAAGCGCGTCGCGGTGACAACACGCTGAACCTGCTGCCCACCGAGTACAAGCTACTG
GAATACCTGATGCGCCACAGCGGCCAGGTAATCACGCGGATGATGATTTTCGAGGAAGTCTGGGGCTACCACTTCGACCC
GGGCACCAACCTGATCGACGTGCACATCGGCCGCCTTCGCAAGAAAATCGACTCCCCCGGCCAATCGCCGCTGATCCGTA
CGGTACGGGGCTCCGGCTATGCCATTGCTGAACCCGTCTAA

Protein sequence : 
MPRVLTIEDDAVTGQEIVAELTSHGLEVDWADNGREGLAKAIAGGYDLITLDRMLPEVDGLTIVTTLRSLKIATPILMIS
ALSDVDERVRGLRAGGDDYLTKPFASDEMAARVEVLLRRNSVPMTQTRLQVADLQLDLISHEARRGDNTLNLLPTEYKLL
EYLMRHSGQVITRMMIFEEVWGYHFDPGTNLIDVHIGRLRKKIDSPGQSPLIRTVRGSGYAIAEPV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 1e-33 41
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 1e-33 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PputGB1_2876 YP_001669106.1 two component transcriptional regulator BAC0111 Protein 2e-46 47
PputGB1_2876 YP_001669106.1 two component transcriptional regulator BAC0347 Protein 6e-42 45
PputGB1_2876 YP_001669106.1 two component transcriptional regulator BAC0125 Protein 1e-40 45
PputGB1_2876 YP_001669106.1 two component transcriptional regulator BAC0197 Protein 3e-38 43
PputGB1_2876 YP_001669106.1 two component transcriptional regulator BAC0308 Protein 6e-39 42
PputGB1_2876 YP_001669106.1 two component transcriptional regulator BAC0083 Protein 5e-41 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PputGB1_2876 YP_001669106.1 two component transcriptional regulator VFG0596 Protein 4e-34 41
PputGB1_2876 YP_001669106.1 two component transcriptional regulator VFG1389 Protein 2e-32 41