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Name : PputGB1_2858 (PputGB1_2858) Accession : YP_001669088.1 Strain : Pseudomonas putida GB-1 Genome accession: NC_010322 Putative virulence/resistance : Unknown Product : ImpA family type VI secretion-associated protein Function : - COG functional category : S : Function unknown COG ID : COG3501 EC number : - Position : 3204068 - 3206146 bp Length : 2079 bp Strand : - Note : TIGRFAM: type VI secretion system Vgr family protein; PFAM: Rhs element Vgr protein; KEGG: pae:PA0262 hypothetical protein DNA sequence : ATGTCTAGCCAATCCGATTTGCGCTTCACCTTCCAGCCGCTGGTGGGCCGTAGCGAGTTCGAAGTGGTGTCGTTCGAGCT GGATGAAGCCATCAGCACACCATTCCAGTTGCAGCTGGAACTGATCAGTTTCGAAGACGCTGTCGACTTTGGCCAACTGC TCGACAAACCGGTGTTGTTCACCCTTTGGCGCGGTGAGCGCCCGCTGCGCTATGTGCACGGCCTGGTCAGCACGTTTAGC CAAGGTGAAACGGGCTTCCATCGCACCCGCTACCACGCCTTGGTCGAGCCCGTGCTGGCCCGTGCGGGGTTGCGCTCGAA CTGGCGCATCTTCCAGCAGAAAACCGTATCGCAAATCCTCGAAATCATGCTCAAGCGCCAGGGCGTGAATGCGTACCAGC TCAAGTGCATCGATCAGCACCAGGTGCGCGAATTCTGCGTGCAGGCCGGTGAAACCGACCTCGATTTCATTGCTCGCCTG GCCGCCGAAGAGGGCCTCGTCTACCGCTTCGAGCACACGCCGAAAGGCCACACGCTGATCATCACCGACCGGCTGCTGGC GCTGGGGCAGATCAGTCAGGGCGTCATCAAGGCCGACGACGAGGATGAAGGTTTCTTCGAACAGGCTGACATCGACCCCA ACCAGGTGCTGTACCACGCCAACAGTGCTGGCGATCAGGCAATACCCTGCCTGCGCCACCTGCGCTACAGCGAGCAGGTA CGTACCGCGCGCCAGGTTCAGCGCGACCACACCTTCACCCACCCGGCTTATCGCCTGGAGCTACGCGCCGAGGGCGGCGA CCTGGCGCACCAGTCCACCGCCTACGAACGCTTCGACTACCCCGGCCGCTACAAGCGCGAGGCGGTCGGCGTGCCTTTCA CCGCCACCCGCATCACGGCCCTGCGCCATGATGCCCGCATGGCCGAGGTGGAAGGCGACGATGTGCGCCTGCAACCGGGG CTGAGTTTCACCCTGATCGAGCACCCGCGCGAAGACCTGAACCTGCATTGGCGGGTCACCCGCGTGCACCACGAGGGCAC CCAGTTCACCAGCCTGCAGGAAGAGGCAGCAGGTGCGCAGCTAGGCACCCGCTACAAGCAGGACGCCGTGCTGGTCCCCG GCAGAACCGAATGGCGCCCGGCCCCCTTGCCCAAACCGCGCATCGACGGCCCGCACATGGCCACGGTGGTGGGGCCGAAG GGCGAGGAAATCTACTGCGACCAATGGGGCCGGGTGAAGGTCAGCTTTCCTTGGGACCGGGAGAGCGAAAACAACGAGTT CAGCTCCTGCTGGGTACGCGTGTCGCAGGGCTGGGCCGGTGGTAGCTGGGGTTCGATGGCCATCCCGCGCATCGGCCAGG ACGTGATCATCCAGTACGTCAACGGCGACCCGGACCAGCCGATGATCACCGGGCGCACCTACTGCGGCAACCAGCTGCCG CCCTATGACCTGCCCGAACACAAGACACGCATGACCATCAAGAGCCAGACCCACAAGGGTGATGGCTACAACGAGCTGCG TTTCGAAGACGAGTTGGGCAAAGAGGAAGTGTTCATTCATGCCCAGCGGGACCAGAACAATGTGGTCGGCAATGATGAGA CCACGCGTGTCGGGCGCAATCGGATCGAGCAGGTCGGTCAAGATCAGCAGTTGAACATTGGTAACGACTACCGCCAGGAC ACAGCGCGTGACCACACCCAGGTCATCGGTCAAAACTGCCTTGTGGACATCAAACACAACCTGATCGAGACGGTGGGCAA CGATCATCGCGAATCTACCGGTGCCAATTACCACGCTTTCATAGGCAAGGACAGCGAGCTTGTCGTCAAAGGTGCCCAGA AGGTCAAGGTCGGGCAGGGCATGGAACAACGCACCACGGTCTACCAGCTGTGGGCCAGTGAGCGCATCGAGCTTAGAACG CCAGGTGGCAGCCTGGTGTTGGATGAGCAGGGCATCACCCTCAATGGGCTGACACTCGACCTGCTGGGACAAACCAAGGC GGTTGCGAAAGGTGATGGAAATACCCAGTCACTAGCGCTTAGGCCGGAAGCCGGCACCACCTGTGAGGCCAAGTCGTGA Protein sequence : MSSQSDLRFTFQPLVGRSEFEVVSFELDEAISTPFQLQLELISFEDAVDFGQLLDKPVLFTLWRGERPLRYVHGLVSTFS QGETGFHRTRYHALVEPVLARAGLRSNWRIFQQKTVSQILEIMLKRQGVNAYQLKCIDQHQVREFCVQAGETDLDFIARL AAEEGLVYRFEHTPKGHTLIITDRLLALGQISQGVIKADDEDEGFFEQADIDPNQVLYHANSAGDQAIPCLRHLRYSEQV RTARQVQRDHTFTHPAYRLELRAEGGDLAHQSTAYERFDYPGRYKREAVGVPFTATRITALRHDARMAEVEGDDVRLQPG LSFTLIEHPREDLNLHWRVTRVHHEGTQFTSLQEEAAGAQLGTRYKQDAVLVPGRTEWRPAPLPKPRIDGPHMATVVGPK GEEIYCDQWGRVKVSFPWDRESENNEFSSCWVRVSQGWAGGSWGSMAIPRIGQDVIIQYVNGDPDQPMITGRTYCGNQLP PYDLPEHKTRMTIKSQTHKGDGYNELRFEDELGKEEVFIHAQRDQNNVVGNDETTRVGRNRIEQVGQDQQLNIGNDYRQD TARDHTQVIGQNCLVDIKHNLIETVGNDHRESTGANYHAFIGKDSELVVKGAQKVKVGQGMEQRTTVYQLWASERIELRT PGGSLVLDEQGITLNGLTLDLLGQTKAVAKGDGNTQSLALRPEAGTTCEAKS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| vgrG | AAN64196.1 | VgrG | Not tested | macrophage toxin pathogenicity island | Protein | 5e-110 | 43 |
