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Name : PputGB1_2847 (PputGB1_2847) Accession : YP_001669077.1 Strain : Pseudomonas putida GB-1 Genome accession: NC_010322 Putative virulence/resistance : Virulence Product : NAD-dependent epimerase/dehydratase Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG0451 EC number : - Position : 3191471 - 3192445 bp Length : 975 bp Strand : + Note : PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: pen:PSEEN3360 UDP-glucuronate 5'-epimerase DNA sequence : ATGCCCGTACTGATTACCGGCGTGGCCGGCTTCATCGGCTTCCATGTCGCTCGCCGCCTGTGCGAGGCAGGCATCGATGT GGTCGGCATCGACAACCTCAATGCCTACTACAGCGTCGAGCTGAAACTGGCGCGCCTGCAACGGCTGTTCGGCTTCGCCA ATTTCCGCTTCCAAACCCTCGATATCGCCAACAGCGCCGACCTGCAACAGCTGTTCGCCAGGCAGGCGTTCAGTGAAGTG ATCCACCTGGCGGCCCAGGCCGGGGTGCGCTATTCGCTGGACAACCCTGGCGCCTACGGGCAGGCCAACCTGGTCGGTTT CCTCAACATCCTCGAAGCCTGCCGCCAGCAGCCACCACGCCACCTGATCTACGCCTCCAGCAGCTCGGTGTACGGCGCCA ATGCCAAGCTGCCGTTCAGCATCGATGACCCGGTCGAGCAGCCGGTTTCGCTGTACGCCGCCAGCAAGCGTGCCAATGAA CTGATGGCGCACAGCTACGCGCACCTGTATCGGATACCAACCACCGGCCTGCGCTTTTTCACCGTCTACGGCCCCTGGGG CCGGCCCGACATGGCGCTGTTCAAGTTCACCCGCGCCATGCTCGAAGGACGGCCGATCGAGGTTTACAACAACGGCCTGA TGGGCCGCGACTTCACCTACATCGACGACATCGTCGAAAGCATCGTGCGCCTGCGCCTGAAACCACCCCGGCCGACCGAG GGGCAGCCGCCCTGCCAGCTGTTCAACATCGGCCGTGGGCAGCCGGTAAGGCTGCTGCAATTCGTCGAATGCCTGGAAGC CGCCTTGGGCATCAAGGCCCAGCGCGACTACCTGCCGCTACAAGCGGGCGACGTGCTGGAGACCTGGGCCGATGTCGGCT CACTGGCACGCTGGATCGACTACTCCCCAGGCACGTCGCTGGAGCACGGCGTCAACGCTTTCGTTGGCTGGTACCGGGAT TTCTACCGGGTTTGA Protein sequence : MPVLITGVAGFIGFHVARRLCEAGIDVVGIDNLNAYYSVELKLARLQRLFGFANFRFQTLDIANSADLQQLFARQAFSEV IHLAAQAGVRYSLDNPGAYGQANLVGFLNILEACRQQPPRHLIYASSSSVYGANAKLPFSIDDPVEQPVSLYAASKRANE LMAHSYAHLYRIPTTGLRFFTVYGPWGRPDMALFKFTRAMLEGRPIEVYNNGLMGRDFTYIDDIVESIVRLRLKPPRPTE GQPPCQLFNIGRGQPVRLLQFVECLEAALGIKAQRDYLPLQAGDVLETWADVGSLARWIDYSPGTSLEHGVNAFVGWYRD FYRV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| cap1I | AAA64648.1 | type 1 capsule synthesis gene | Virulence | SCCcap1 | Protein | 5e-87 | 54 |
