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Name : PputGB1_2765 (PputGB1_2765) Accession : YP_001668995.1 Strain : Pseudomonas putida GB-1 Genome accession: NC_010322 Putative virulence/resistance : Virulence Product : EvpB family type VI secretion protein Function : - COG functional category : S : Function unknown COG ID : COG3517 EC number : - Position : 3101078 - 3102580 bp Length : 1503 bp Strand : + Note : TIGRFAM: type VI secretion protein, EvpB/VC_A0108 family; PFAM: protein of unknown function DUF877; KEGG: psp:PSPPH_0133 hypothetical protein DNA sequence : ATGACCGACAAGCAAACCGCACCGCAACAGGCCGGCGAACTGGTCGAAGTGGAAAACTTCGCCCCACAGCCCTCGCTGCT GGACAGCATCATTTCGCAAAGCCGCGTGGCCCGTTCCGACACCGAGCGCAACCGCACCCGCGACCTGATCGGCGAACTGG TGAACCAGGTGCTCGAAGGCGAAATGACCCCGAGCAAGGACCTGATCGCCGTGCTCGATTCGCGTATCGCCGAAATCGAC GCGATGCTCTCCGAGCAGATGAACGAAATCATGCACGCTCGCGAGTTCCAGCAGCTGGAAGCTTCCTGGCGTGGCCTGAA GTACCAGGTAGACCAGACCGAAACCAGCACCACGCTGAAGATTCACCTGCTCAATGCCTCGAAGAAAGACCTGGTACGTG ACCTGAAGGCCGCCAGCGAATTCGACCAGAGCGCACTGTTCAAGAAAGTCTACGAAGAAGAATACGGCACCTTCGGTGGT GCGCCGTTCGGCATGCTGATCGGCGACTACGAGTTCAACCGCAACCCCGAAGACATGTACCTGCTGGAAGAGATCTCGCA CGTGGCCGCAGCGGCGCACGCGCCGTTCATCTCCGCCGCCTCCCCTGAACTGTTCGGCTGGGACTCGTTCACCGAGATGT CCGGCCCGCGTGACCTGGCGAAGATCTTCGACACCGTCGAATACGCCAAGTGGAAGTCGTTCCGCGCATCGGAAGACTCC CGCTACGTCGGCCTCACCCTGCCCCACGTGCTCGGCCGCCTGCCGTATGGCCCCGATACCACGCCGGTGGAGGAATTCAA CTTCGTCGAAAGCGTCGACGGCCGCGACCACAACAAGTACCTGTGGATGAACGCCGCCTATGCCCTTGGCACCCGCGTCA CCGATGCCTTCGCCCGCTACGGCTGGTGCGTGGCCATCCGCGGCGTGGAAGGGGGCGGCCTGGTCGAAGGCCTGCCGACC CACACCTTCAACACCGACGATGGCGAAATCGCCCTCAAGTGCCCTACCGAAATCGCCATTACCGACCGCCGCGAAAAAGA GCTGTCGGACCTGGGCTTCATCCCTCTGGTGCACTGCAAGGGCACCGACTATGCCGCCTTCTTCGGCACCCAGTCGGCGC AGAAGCAAAAGCAGTACAACACCGACATCGCCAATGCCAATGCACGCCTGTCGGCCCAACTGCAATACATCTTCGCCACC TCGCGTATCGCCCACTACATGAAGGCGATCATGCGCGACAAGATCGGCAGCTTCGCCTCGCGCATGGACGTGGAGCGCTT CCTCAACCAGTGGCTGGCCAGCTATGTGCTGCTCGACGATACCGCCAGCCAGGAAGCCAAGGCCAAGTTCCCGCTGCGTG AGGCCCGCGCCGAGGTGTTCGAGGTGCCAGGCAAGCCAGGCGTGTACAAGGCCGTCACGTACCTGCGCCCGCACTACCAA CTGGACGAACTGACCGCCTCGCTGCGGCTGGTCGCCGAGCTGCCACAAGGCGCGCGCGGCTGA Protein sequence : MTDKQTAPQQAGELVEVENFAPQPSLLDSIISQSRVARSDTERNRTRDLIGELVNQVLEGEMTPSKDLIAVLDSRIAEID AMLSEQMNEIMHAREFQQLEASWRGLKYQVDQTETSTTLKIHLLNASKKDLVRDLKAASEFDQSALFKKVYEEEYGTFGG APFGMLIGDYEFNRNPEDMYLLEEISHVAAAAHAPFISAASPELFGWDSFTEMSGPRDLAKIFDTVEYAKWKSFRASEDS RYVGLTLPHVLGRLPYGPDTTPVEEFNFVESVDGRDHNKYLWMNAAYALGTRVTDAFARYGWCVAIRGVEGGGLVEGLPT HTFNTDDGEIALKCPTEIAITDRREKELSDLGFIPLVHCKGTDYAAFFGTQSAQKQKQYNTDIANANARLSAQLQYIFAT SRIAHYMKAIMRDKIGSFASRMDVERFLNQWLASYVLLDDTASQEAKAKFPLREARAEVFEVPGKPGVYKAVTYLRPHYQ LDELTASLRLVAELPQGARG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| aec18 | YP_851426.1 | hypothetical protein | Not tested | PAI II APEC-O1 | Protein | 2e-85 | 42 |
| aec18 | AAQ96712.1 | Aec18 | Not tested | AGI-1 | Protein | 1e-85 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| PputGB1_2765 | YP_001668995.1 | EvpB family type VI secretion protein | VFG2070 | Protein | 1e-107 | 52 |
| PputGB1_2765 | YP_001668995.1 | EvpB family type VI secretion protein | VFG2475 | Protein | 9e-88 | 42 |
| PputGB1_2765 | YP_001668995.1 | EvpB family type VI secretion protein | VFG2093 | Protein | 5e-87 | 42 |
