Gene Information

Name : PputGB1_2764 (PputGB1_2764)
Accession : YP_001668994.1
Strain : Pseudomonas putida GB-1
Genome accession: NC_010322
Putative virulence/resistance : Virulence
Product : type VI secretion protein
Function : -
COG functional category : S : Function unknown
COG ID : COG3516
EC number : -
Position : 3100524 - 3101063 bp
Length : 540 bp
Strand : +
Note : TIGRFAM: type VI secretion protein, VC_A0107 family; PFAM: conserved hypothetical protein; KEGG: psp:PSPPH_0134 hypothetical protein

DNA sequence :

ATGGCGAAGAAGGAAAGCACTCAGCACAAACTCGACCGCGTCCGCGCGCCTCGGGTCCATATCACCTACGACGTGGACAT
CGGCGATGCCATCGAGAAAAAGGAGCTGCCCTTCGTCGTCGGCGTACTGGGCGACTTTTCCGGCAACCCGCTGGAGCCGC
TGCCCAAGCTCAAGGACCGCAAGTTCGTCTTCATCGACCGCGACAACTTCAACGGTGTGCTCAAGGGTATCAAGCCACGC
CTGACCTACCGCGTCGACAACACCCTGGCCAAGAACGGCACCCAGCTGGGCGTGGAACTGAACTTCAACAGCCTCGAAGA
CTTCGAGCCACAGAACGTGGTCAAGCAGGTGGAGCCACTGCGCAAGCTGCTGGAAGTGCGCAACAAACTGGCCGACCTGC
GCAACAAGATGGGCGGCAACGACAAGCTCGAAGAGCTGCTGATGGACGTGCTGCAAAACACCGAAAAGCTCAAGACCCTG
GGCAAGGAATTCGGCCGTGAAGCCGAAGTGAAAGACCCATCCAGCAGCGATCGCGCCTGA

Protein sequence :

MAKKESTQHKLDRVRAPRVHITYDVDIGDAIEKKELPFVVGVLGDFSGNPLEPLPKLKDRKFVFIDRDNFNGVLKGIKPR
LTYRVDNTLAKNGTQLGVELNFNSLEDFEPQNVVKQVEPLRKLLEVRNKLADLRNKMGGNDKLEELLMDVLQNTEKLKTL
GKEFGREAEVKDPSSSDRA

• Homologs from PAI DB

Gene	GenBank Accn	Product	Virulance or Resistance	PAI or REI	Alignment Type	E-val	Identity
STY0297	NP_454879.1	conserved hypothetical protein	Not tested	SPI-6	Protein	1e-30	45

• Homologs from VFDB (virulence genes)

Gene	GenBank Accn	Product	ID of source DB	Alignment Type	E-val	Identity
PputGB1_2764	YP_001668994.1	type VI secretion protein	VFG2069	Protein	6e-31	42