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Name : PputGB1_0270 (PputGB1_0270) Accession : YP_001666519.1 Strain : Pseudomonas putida GB-1 Genome accession: NC_010322 Putative virulence/resistance : Unknown Product : RNA-binding S1 domain-containing protein Function : - COG functional category : K : Transcription COG ID : COG2183 EC number : - Position : 316897 - 319221 bp Length : 2325 bp Strand : - Note : PFAM: RNA binding S1 domain protein; SMART: Resolvase RNase H domain protein fold; KEGG: pen:PSEEN0226 RNA-binding transcription accessory protein DNA sequence : ATGGACAGCATCAACAGCCGTATCGCCGAGGAACTGGGCGTACGCCCCCAGCAGGTCGAGGCGGCCGTGGGCCTGTTGGA CGAAGGCTCGACCGTGCCCTTCATCGCCCGTTACCGCAAGGAAGTGACCGGTAGCCTGGACGATACCCAGTTGCGCCATC TGGAAGAACGCCTGCGCTACCTGCGCGAACTCGACGAGCGCCGCGCCAGCATCCTGTCCAGCATCGAGGAGCAGGGCAAG CTGACCCCGGAACTGGCCCGCGAGATCAAGCTGGCCGACACCAAGACGCGCCTCGAAGACCTGTACCTGCCGTACAAGCA GAAGCGTCGCACCAAGGGCCAGATCGCCCTGGAAGCCGGCCTTGGCGAGCTGGCCGACGGCCTGTTCAACGACCCGACCC TGGCACCGGAAAGCGAAGCCGCACGCTTCGTCGACGCCGAAAAGGGCGTGGCCGACGTCAAGGCGGCACTGGAAGGCGCC AAGTACATCCTGATGGAGCGCTTTGCCGAAGACGCCGCCCTGCTCGACAAGCTGCGCAGTTTCCTCAAGCAGGAAGCCGT GCTCAGCGCCCGCCTGGTGGCCGGCAAGGAAGAAGAAGGCGCCAAGTTCCGCGATTACTTCGCCCACGACGAACTGCTGC GCACTGCGCCGTCGCACCGTGCGCTGGCCATCTTCCGCGGGCGCAATGAAGGTGTTTTGAGCGCATCGCTCAAGGTCGGC GAAGAGCTGCCCGGTACCCTGCACCCATGCGAACTGATGATCGGCAGCCACGTCGGCATCGAAAACCGCGGCCGCCCGGC CGACAAGTGGCTGGGCGAAGTGGTGCGCTGGACCTGGAAGGTCAAGCTGTATACCCACCTGGAAACCGACCTGTTCGGCG AGCTGCGGGACAACGCCGAAGGCGAAGCGATCAACGTGTTCGCCCACAACCTGCACGACCTGCTGCTGGCCGCCCCGGCT GGCCCACGTGCTACCCTGGGCTTCGACCCGGGCCTGCGCACAGGCTGCAAGATCGCCGTGGTCGATGCCACCGGCAAGCT GCTGGACTACACCACGGTCTACCCGCACGCGCCGAAGAACGACTGGGACCGCACCCTTTCCGTCATGGCCGCACTGTGCG CCAAGCACTCGGTGGAACTGATCGCTATCGGCAACGGCACCGCCAGCCGTGAAAGCGACAAGCTGGTGGCCGAGCTGGTT AAAAAATACCCAGCACTGAAGATCACCAAGATCATGGTCTCCGAAGCCGGCGCGTCGGTGTATTCGGCCTCGGAACTGGC CGCCCGCGAGTTCCCGGACCTGGACGTGTCGATCCGTGGTGCCGTGTCGATTGCTCGCCGCCTGCAGGACCCGCTGGCCG AGCTGGTGAAGATCGACCCGAAATCCATCGGTGTCGGCCAGTACCAGCACGACGTGTCCCAGCTGAAACTGGCGCGTGGC CTGGACGCCGTGGTCGAGGACTGCGTGAACGCCGTGGGTGTGGACGTGAACACCGCCTCGGTGGCGCTGCTGACCCGTAT CTCCGGCCTCAACGCCACGCTGGCACAGAACATCGTTGCCCACCGCGATGCCAACGGCCCCTTCGCCACCCGTGCAGCGC TGAAAAAGGTCAGCCGCCTGGGTGAAAAAACCTTCGAGCAAGCCGCCGGCTTCCTGCGTGTGATGAACGGCGACAACCCG CTGGACGCCTCTGCGGTGCACCCTGAGGCCTACCCGCTGGTGCAGCGCATCGCCGCCGACACCGAGCGCGACATTCGCTC GCTGATTGGCGACAGCAGCTTCCTCAAGCGTTTGGACCCGAAGAAGTTCACCGACGAGTCCTTCGGCCTGCCGACCGTCA CCGACATCCTGCAAGAGCTGGACAAGCCTGGTCGCGACCCACGCCCCGAGTTCAAGACCGCCACCTTCCAGGACGGCGTC GAAGACCTCAAGGACCTCGAACCCGGCATGATCCTGGAAGGCGTGGTGACCAACGTCACCAACTTCGGCGCCTTCGTCGA CATCGGTGTGCACCAGGACGGCCTGGTACACATCTCGGCACTGTCGGAGAAGTTCATCAAAGACCCGCGTGAAGCGGTCA AGGCCGGCGATGTGGTCAAGGTCAAAGTCATGGAAGTGGATATCCCGCGCAAGCGCGTCGGCCTGTCCATGCGCATGAGC GACACCCCCGGCGAAAAGGTCGAAGGCAACCGTGGCGGCAATCGTGGCAATGGCGGCAACCGCCAGCAGCAGGCCCCGCG CCAGCGTGAAACCACCACTGCCGCACCGGCCAACAATGCCATGGCCTCCCTGTTCGCCAACGCCAAGCAGTTGAAGAAGA AGTGA Protein sequence : MDSINSRIAEELGVRPQQVEAAVGLLDEGSTVPFIARYRKEVTGSLDDTQLRHLEERLRYLRELDERRASILSSIEEQGK LTPELAREIKLADTKTRLEDLYLPYKQKRRTKGQIALEAGLGELADGLFNDPTLAPESEAARFVDAEKGVADVKAALEGA KYILMERFAEDAALLDKLRSFLKQEAVLSARLVAGKEEEGAKFRDYFAHDELLRTAPSHRALAIFRGRNEGVLSASLKVG EELPGTLHPCELMIGSHVGIENRGRPADKWLGEVVRWTWKVKLYTHLETDLFGELRDNAEGEAINVFAHNLHDLLLAAPA GPRATLGFDPGLRTGCKIAVVDATGKLLDYTTVYPHAPKNDWDRTLSVMAALCAKHSVELIAIGNGTASRESDKLVAELV KKYPALKITKIMVSEAGASVYSASELAAREFPDLDVSIRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVSQLKLARG LDAVVEDCVNAVGVDVNTASVALLTRISGLNATLAQNIVAHRDANGPFATRAALKKVSRLGEKTFEQAAGFLRVMNGDNP LDASAVHPEAYPLVQRIAADTERDIRSLIGDSSFLKRLDPKKFTDESFGLPTVTDILQELDKPGRDPRPEFKTATFQDGV EDLKDLEPGMILEGVVTNVTNFGAFVDIGVHQDGLVHISALSEKFIKDPREAVKAGDVVKVKVMEVDIPRKRVGLSMRMS DTPGEKVEGNRGGNRGNGGNRQQQAPRQRETTTAAPANNAMASLFANAKQLKKK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| NMB0075 | NP_273139.1 | transcriptional accessory protein Tex | Not tested | IHT-A | Protein | 0.0 | 63 |
