Gene Information

Name : PputGB1_2693 (PputGB1_2693)
Accession : YP_001668926.1
Strain : Pseudomonas putida GB-1
Genome accession: NC_010322
Putative virulence/resistance : Unknown
Product : glycine betaine/L-proline ABC transporter ATPase
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG4175
EC number : -
Position : 3019390 - 3020550 bp
Length : 1161 bp
Strand : -
Note : KEGG: pst:PSPTO_3060 glycine betaine/L-proline ABC transporter, ATP-binding protein; TIGRFAM: glycine betaine/L-proline ABC transporter, ATPase subunit; PFAM: ABC transporter related; SMART: AAA ATPase

DNA sequence :
ATGAGCCATGCCGATGAGATTCTTTCGGTAAACAACATCTTCAAGGTGTTCGGTCCCAACCCGAACATGGCCATGGAGAT
GCTCCGCAAGGGCGCCGACAAGAACGAAATCTTCAGCAAGACCGGCCACGTTGTCGGCGTGTTCGATGCAAGCTTTTCCG
TCAAGCGTGGCGAGATTTTCGTCATCATGGGCCTCTCGGGCTCGGGCAAGTCGACCATGGTGCGGCTGTTCAACCGCCTG
ATCGAACCCACTTCCGGCAGCATTCACCTCAACGGCAAGGAAATTACCGGTCTTTCAGACAAAGCCTTGCTGGATGTGCG
CCGCAAGGAAATGGGCATGGTGTTTCAGTCCTTCGCGTTGATGCCGCATATGAGCGTGCTTGAGAACACCGCCTTCGGCC
TGGAAATTGCCGGTGTACCGGAAGCCGAACGCCACAGCCGCGCCCGTGAAGCCTTGAGCCAGGTTGGCTTGGCCGGTCAC
GAGAACAGTTACCCGCACCAGTTGTCTGGTGGCATGCAGCAGCGTGTGGGCCTGGCCCGGGCGTTAGCCAACGACCCGGC
GATCTTGCTGATGGACGAGGCGTTTTCCGCACTCGACCCGCTGATCCGCAGCGAGATGCAGGGCGAACTGATCCGCCTGC
AGGCTGAGCAACAACGCACCATCATCTTCATTTCCCATGACATCGAAGAAGCCATCCGCATCGGCCATCGCATTGCGATC
ATGGAAGGTGGCCGCGTGGTGCAGATCGGCACCCCACAAGAGCTGATCAACCAGCCGGCCAACGACTACGTGCGTACTTT
CTTCAAGAGCTTCGACAGCTCGCGGGTGCTCAAGGCCGGCGATGTGGCCAGGTTCGACCCGGCCGTGGTGTGCAAGGTCA
ATGGCAAGGCGCCGAGCTTCCAGGCCGGCGTGCCGTTTGGCTACCTGGTCGACGAGCGCGGGCAGTTGCTGGGCGTGGTC
GACACCGACGTCAACGGCGCCACTGCCAGTGACCGCTACAGCCTGCACGAACAGCGCCCGGTGTACACCGACACGCCGCT
GCACGAAGTCCTCGGGATTGCTGCCGACCTGCCGTACCCGGTGCCGGTGCTCGACCGTCAGGGCGCCTTCAAGGGCACGC
TGTCGAAGAACGAGCTGCTGCAGACCCTGAGCCGCAACTAA

Protein sequence :
MSHADEILSVNNIFKVFGPNPNMAMEMLRKGADKNEIFSKTGHVVGVFDASFSVKRGEIFVIMGLSGSGKSTMVRLFNRL
IEPTSGSIHLNGKEITGLSDKALLDVRRKEMGMVFQSFALMPHMSVLENTAFGLEIAGVPEAERHSRAREALSQVGLAGH
ENSYPHQLSGGMQQRVGLARALANDPAILLMDEAFSALDPLIRSEMQGELIRLQAEQQRTIIFISHDIEEAIRIGHRIAI
MEGGRVVQIGTPQELINQPANDYVRTFFKSFDSSRVLKAGDVARFDPAVVCKVNGKAPSFQAGVPFGYLVDERGQLLGVV
DTDVNGATASDRYSLHEQRPVYTDTPLHEVLGIAADLPYPVPVLDRQGAFKGTLSKNELLQTLSRN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
opuAA YP_281521.1 glycine betaine transport ATP-binding protein Not tested Not named Protein 1e-85 49