Gene Information

Name : PputGB1_2662 (PputGB1_2662)
Accession : YP_001668895.1
Strain : Pseudomonas putida GB-1
Genome accession: NC_010322
Putative virulence/resistance : Unknown
Product : ABC transporter-like protein
Function : -
COG functional category : R : General function prediction only
COG ID : COG1123
EC number : -
Position : 2979933 - 2981549 bp
Length : 1617 bp
Strand : +
Note : PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; KEGG: nfa:nfa17450 putative ABC transporter ATP-binding protein

DNA sequence :
ATGAACACCCCATTGGTGCGTATCCAGCAGTTAAGCGTCGATTATCCAGGCAACCCGCAAGCCGCCGTACAGGCGCTGGA
CCTGGAAATTGCCGCAGGTGAAATTGTCTGCCTGGTGGGCGAGTCCGGTTCGGGCAAATCCACTACCGCTGCGGCCCTCG
CCGGGCTGCTGCCAGCCGCGGCGCGGCAGCGAGGCCAACTGTGGCTGCAAGGCCAGGCGCTGGAACAATTTGCTGAACGT
GACTGGTGCCAACGCCGTGGCCGCCTGGTCGGCTTCGTGCCACAAGACCCCGGCACCTCGCTGGACCCGGTCAAGACCAT
CGGTGCACAGCTGGTCGAAGCCATGACCGTGCATGGCGTGCCGGGCCGTGAAGCCGGTGCGCGCGGGCTGGCACTGCTGC
AGCAGGTGGGCCTCAGGGATGCCAAGCAACTGTCCCGCCGCTACCCCCATGAGCTGTCGGGTGGCATGTGCCAGCGGGTG
TTGATCGCAATCGCCTTGGCCAATGACCCACCGCTGTTGATCGCCGACGAACCCACCAGCGCCCTGGATGTCAGCGTGCA
GCGGCAAATTCTAGACCGCCTGCAGCAACTGGTGCGCGCACGCGGCAGCAGCTTGTTGCTCATCACCCATGACCTGGCGG
TGGCGCTGGACCGTGCCGATCGCATTCTGGTGATGCGCAACGGCCAACTGCTGGAGAGCGGCACGCCCGCGCAGTTATGG
CATGCACCCAAGCATCCCTACACGCGGCAGCTGCTGGCGGCCTCACCGTTGGCACGCCTGCAGCAACGGCGTACTGGCCC
AGCCAGCGCAGTTGGCGAACCCCTGTTGCAGGTCAGTGGCCTGATGCGGCGTTTCAACCGGCATGCCGCGCCGGTGGTCG
ACGGTGTCAGCTTCACCCTGCCCCGTGGCAGTACCACCAGCCTGGTGGGCGAGTCAGGTTCGGGTAAGTCCACCACTGCC
CGCATCATCCTGGCCTTGGAGCAAGCCAGTGCAGGCAGCGTGTTGTTCGACGGCCAGCCAATACTGGGCGCCAGCCGGCG
CCAATTGCATGCCTACCGGCGGCGAGTGCAACTGGTCTACCAGAACCCCTGGGCTGCGTTGGACCCTAGGCACAACCTGC
TGCAGATCGTCAGTGAGCCGATGCGCGCCTTTGCCATTGGCGCGCGACGAGACGATCGGCAGCGGGTGCTGGGTTTGCTG
GAGCGGGTCGGGTTACCCGCCGAGTTGCTGCTGCGTCGGCCTGGAGCGTTGTCTGGTGGGCAGCGCCAGCGTGTGGCTAT
CGCTCGTGCCTTGGCGGCTGAACCGGAGCTGCTGGTGCTCGATGAGCCGCTGTCGGCCCTGGATGCGCCCGTGCAGGCAC
AGGTGTTGGCGTTGTTGCAGCGTTTGCAGGCTGAGCTGGGGCTGACCTACCTGTTCATTTCTCACGACCTGGCGACGGTG
CGCGGCATCAGCGATCAGGTGCTGGTGATGCGCCAGGGGCGGCTGGTGGACCAAGGGCCGACCGAGCAGGTGTTCGAGCG
GCCCGCGAGTGACTACACGCGGAGCTTGCTGGAGGATATGCCAGGATTGGGCCGGGTATTGCAGGGGGAGCGGCCCTTGG
TGCGTGAGGTGGGGTGA

Protein sequence :
MNTPLVRIQQLSVDYPGNPQAAVQALDLEIAAGEIVCLVGESGSGKSTTAAALAGLLPAAARQRGQLWLQGQALEQFAER
DWCQRRGRLVGFVPQDPGTSLDPVKTIGAQLVEAMTVHGVPGREAGARGLALLQQVGLRDAKQLSRRYPHELSGGMCQRV
LIAIALANDPPLLIADEPTSALDVSVQRQILDRLQQLVRARGSSLLLITHDLAVALDRADRILVMRNGQLLESGTPAQLW
HAPKHPYTRQLLAASPLARLQQRRTGPASAVGEPLLQVSGLMRRFNRHAAPVVDGVSFTLPRGSTTSLVGESGSGKSTTA
RIILALEQASAGSVLFDGQPILGASRRQLHAYRRRVQLVYQNPWAALDPRHNLLQIVSEPMRAFAIGARRDDRQRVLGLL
ERVGLPAELLLRRPGALSGGQRQRVAIARALAAEPELLVLDEPLSALDAPVQAQVLALLQRLQAELGLTYLFISHDLATV
RGISDQVLVMRQGRLVDQGPTEQVFERPASDYTRSLLEDMPGLGRVLQGERPLVREVG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
dppD YP_005160017.1 putative peptide ABC transport system ATP-binding protein Not tested Not named Protein 5e-95 44
oppDF2 YP_005686002.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 3e-76 41
oppDF2 YP_005681814.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 3e-76 41
oppDF2 YP_005683914.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 3e-76 41
cpfrc_01561 YP_003783961.1 hypothetical protein Not tested PiCp 6 Protein 3e-76 41