Gene Information

Name : PputGB1_2598 (PputGB1_2598)
Accession : YP_001668833.1
Strain : Pseudomonas putida GB-1
Genome accession: NC_010322
Putative virulence/resistance : Virulence
Product : two component transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 2916958 - 2917623 bp
Length : 666 bp
Strand : +
Note : PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: rme:Rmet_4978 two component transcriptional regulator, winged helix family

DNA sequence : 
ATGCGGGTGTTACTGGTCGAAGATGACAGCATGATTGCCCAGGCACTGCAGGACGCGCTGGCAACAGCGGGTTACGCGGT
GGACTGGGTAGCCGATGGCCCGACCGCAGAGGCGGCCTTGCGCACGCAGGCCTACGACCAGGTGCTGCTCGACCTGGGGT
TGCCCGGACAAGATGGGCTGCAATTGCTGCAACAGCTGCGTGCCGCCGACAACCCCGTTCCCCTGCTGATCATTACCGCG
CGCGCGGAGCTTGATGACCGCGTGCGCGGGCTGGATGGCGGGGCGGATGATTTCTTGCAAAAGCCCTTTGAAATGGCCGA
ATTGCTTGCCAGGATGCGCGCCGTCATGCGGCGCAAAGGCGGGCGCGCGACCCCTGAACTGGGCAACGGCACGGTCAGCC
TGGACCTAGTCAGCAAATGCGCCAGGGTGATGGCTCAGCCACCTGTTCAGCTTTCCAACCGAGAGTTCGCCTTGCTTCAG
GCATTACTGATCCGCCCGGGGGCGATCTTGTCGCGGGCCGAACTGGAGGACCGGCTTTACGGGTGGGGTAACGAGGTTGA
AAGCAACGCGGTGGAGTTTCTCATCCATGCCTTGCGCCGCAAGCTGGGAAAGGATGTGATTCGCAATATCAGGGGGTTGG
GATGGATGGTCTCAAAAGGCACCTGA

Protein sequence : 
MRVLLVEDDSMIAQALQDALATAGYAVDWVADGPTAEAALRTQAYDQVLLDLGLPGQDGLQLLQQLRAADNPVPLLIITA
RAELDDRVRGLDGGADDFLQKPFEMAELLARMRAVMRRKGGRATPELGNGTVSLDLVSKCARVMAQPPVQLSNREFALLQ
ALLIRPGAILSRAELEDRLYGWGNEVESNAVEFLIHALRRKLGKDVIRNIRGLGWMVSKGT

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
armR AAN62112.1 putative response-regulator ArmR Not tested PAGI-2(C) Protein 2e-27 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PputGB1_2598 YP_001668833.1 two component transcriptional regulator BAC0487 Protein 9e-31 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PputGB1_2598 YP_001668833.1 two component transcriptional regulator VFG0473 Protein 9e-32 43