Gene Information

Name : PputGB1_2328 (PputGB1_2328)
Accession : YP_001668565.1
Strain : Pseudomonas putida GB-1
Genome accession: NC_010322
Putative virulence/resistance : Virulence
Product : redoxin domain-containing protein
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG2077
EC number : -
Position : 2595301 - 2595801 bp
Length : 501 bp
Strand : +
Note : PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: pen:PSEEN2672 thiol peroxidase

DNA sequence : 
ATGGCTCAAGTGACTCTCAAAGGCAACCCGGTTCAGGTCAAAGGCGAACTGCCGAAAGTCGGCGCCCAGGCTCCGGCCTT
CTCCCTGGTCGGTGAAGGCCTGGCTGACAAGTCGCTGAAGGACTACGCCGGCAAGCGCAAGGTGCTGAACATCTTCCCGA
GCGTCGACACCCCAACCTGCGCCACCTCCGTGCGCAAGTTCAACGCCCAGGCCAATGATGTAGCCAACACCGTGGTACTG
TGCATTTCCGCCGACCTGCCGTTCGCCCAGGCCCGCTTCTGCGGCGCAGAAGGCCTGGAAAACGTGAAGAACCTGTCGAC
CCTGCGTGGCCGCGAGTTCCTCGAGAACTACGGCGTCGCCATCGCCGACGGCCCACTGGCCGGCCTGGCCGCCCGCGCCG
TGGTGGTGCTGGACGAGAGCGACAAGGTGCTGCACAGCGAGCTGGTTGGTGAAATTGCCGACGAGCCGAACTACGATGCA
GCGCTGGCTGTACTGAAGTAA

Protein sequence : 
MAQVTLKGNPVQVKGELPKVGAQAPAFSLVGEGLADKSLKDYAGKRKVLNIFPSVDTPTCATSVRKFNAQANDVANTVVL
CISADLPFAQARFCGAEGLENVKNLSTLRGREFLENYGVAIADGPLAGLAARAVVVLDESDKVLHSELVGEIADEPNYDA
ALAVLK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tpx YP_001216305.1 thiol peroxidase Not tested VPI-1 Protein 1e-30 49
tagD AAK20781.1 toxR-activated gene D protein Virulence VPI Protein 1e-30 49
tagD AAK20751.1 toxR-activated gene D protein Virulence VPI Protein 1e-30 49
tpx NP_230472.1 thiol peroxidase Virulence VPI-1 Protein 1e-30 49

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PputGB1_2328 YP_001668565.1 redoxin domain-containing protein VFG0087 Protein 4e-31 49