Gene Information

Name : PputGB1_2262 (PputGB1_2262)
Accession : YP_001668499.1
Strain : Pseudomonas putida GB-1
Genome accession: NC_010322
Putative virulence/resistance : Virulence
Product : aldehyde dehydrogenase
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG1012
EC number : -
Position : 2523277 - 2524758 bp
Length : 1482 bp
Strand : -
Note : PFAM: Aldehyde Dehydrogenase; KEGG: pen:PSEEN2032 aldehyde dehydrogenase

DNA sequence :
ATGACCCTCGTTCGTTTCCAGATGTGCATCGACGGCCAATGGCGCGATGCCCAGAGCGGCAAGACCTTCGACAGCCTCAA
CCCGGCCACCGCCCAGGCCTGGGCGCAACTGCCCGACGCCGACGAAGCCGATGTGGAGCTGGCCGTACAGGCCGCCCAGC
GTGCCTTCGACAGCAAAGAGTGGCGCAGCATCACCGCCACCGCACGCGGCAAGCTGCTGCGTCGCCTGGGCGACCTGATT
GCCGAGAACAAGGAACACCTGGCCCAGCTGGAAAGCCGTGACAACGGCAAGCTGATCCGCGAAACCCGCGGCCAGGTTGG
CTACCTGCCAGAGTTCTTCCACTACACCGCAGGCCTGGCCGACAAACTCGAAGGCGGCACCTTGCCGCTGGACAAGCCCG
ACCTGTTCGCCTACACCGTACACGAGCCTATCGGCGTGGTGGCCGGGATCATCCCCTGGAACAGCCCGCTGTACCTCACC
GCGATCAAGCTGGCCCCGGCCCTGGCCGCCGGTAACACCATCGTGCTCAAACCGTCCGAGCACGCCTCGGCGACCATCCT
TGAGCTGGCCCGCCTGGCCCTCGAAGCCGGCTTCCCGGCCGGCGTGGTCAACGTGGTCACCGGTTACGGTCCAACCACCG
GCGCAGCGCTCACCCGCCACCCGCTGGTGCGCAAGATCGCCTTCACCGGCGGCGCTGCCACCGCCCGCCACGTGGTGCGC
AGCAGTGCCGAGAACTTCGCCAAGCTGTCGCTGGAGCTGGGCGGCAAGTCGCCGAACATCATCTTCGCCGACGCCGACCT
GGACAGTGCCATCAACGGTGCCGTGGCCGGCATCTATGCAGCCTCCGGGCAAAGCTGCGTGGCCGGTTCGCGCCTGCTGG
TGCAGGACGAGATCTTCGACGAATTCGTCGAGCGCCTGATTGCCCGCGCCAAGCGTATCCGCATCGGCAACCCGCAGGAC
GACGCCAGCGAAATGGGCCCAATGGCCACCGCACAGCAACTGGCCGTGGTCGAAGGCCTGGTGGCTGCGGCCAAGGCCGA
GGGTGCCAAGCTGCACCTGGGCGGCAAGCGTGCCGAGGTTGAAGGTGACGGCTGGTTCTACGAACCGACCCTGTTCGAGT
GCGACAGCAACTCGATGACCATCATGCAGGAGGAAGTCTTCGGCCCGGTCGCCGCGGTGATCCGCTTCAAGACCGAGGAA
GAAGCCCTGGCCATCGCCAACGACTCCCAGTTCGGCCTGGCTGCCGGCATCTGGACCCGCGACCTGGGCCGTGCCCACCG
CCTGGCCCGTGACGTGCGCTCGGGGATCATCTGGGTCAACACCTACCGCGCCGTGTCGGCCATGGCGCCGATCGGTGGCT
TCAAAAACAGCGGCTACGGCCGCGAGAGCGGCATCGATTCGGTGCTGGCCTATACCGAGCTGAAGACCGTGTGGATCAAC
CTGTCCACCGCACCGATGCCCGACCCGTTTGTGATGCGTTAG

Protein sequence :
MTLVRFQMCIDGQWRDAQSGKTFDSLNPATAQAWAQLPDADEADVELAVQAAQRAFDSKEWRSITATARGKLLRRLGDLI
AENKEHLAQLESRDNGKLIRETRGQVGYLPEFFHYTAGLADKLEGGTLPLDKPDLFAYTVHEPIGVVAGIIPWNSPLYLT
AIKLAPALAAGNTIVLKPSEHASATILELARLALEAGFPAGVVNVVTGYGPTTGAALTRHPLVRKIAFTGGAATARHVVR
SSAENFAKLSLELGGKSPNIIFADADLDSAINGAVAGIYAASGQSCVAGSRLLVQDEIFDEFVERLIARAKRIRIGNPQD
DASEMGPMATAQQLAVVEGLVAAAKAEGAKLHLGGKRAEVEGDGWFYEPTLFECDSNSMTIMQEEVFGPVAAVIRFKTEE
EALAIANDSQFGLAAGIWTRDLGRAHRLARDVRSGIIWVNTYRAVSAMAPIGGFKNSGYGRESGIDSVLAYTELKTVWIN
LSTAPMPDPFVMR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
orf17 AAO17183.1 Orf17 Not tested tcd island Protein 4e-75 42
ORF SG19 AAN62241.1 putative aldehyde dehydrogenase Not tested PAGI-3(SG) Protein 3e-78 42
VC0819 NP_230467.2 aldehyde dehydrogenase Not tested VPI-1 Protein 3e-80 41
unnamed AAK01506.1 putative aldehyde dehydrogenase Not tested PAGI-1 Protein 1e-72 41
aldA AAC12273.1 aldehyde dehydrogenase Virulence VPI Protein 2e-83 41
aldA AAK20747.1 aldehyde dehydrogenase Virulence VPI Protein 2e-83 41
aldA AAK20776.1 aldehyde dehydrogenase Virulence VPI Protein 2e-83 41
aldA-1 YP_001216300.1 aldehyde dehydrogenase Not tested VPI-1 Protein 3e-83 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PputGB1_2262 YP_001668499.1 aldehyde dehydrogenase VFG0082 Protein 1e-80 41