Gene Information

Name : PputGB1_0210 (PputGB1_0210)
Accession : YP_001666459.1
Strain : Pseudomonas putida GB-1
Genome accession: NC_010322
Putative virulence/resistance : Virulence
Product : LytTR family two component transcriptional regulator
Function : -
COG functional category : K : Transcription
COG ID : COG3279
EC number : -
Position : 247027 - 247770 bp
Length : 744 bp
Strand : +
Note : PFAM: response regulator receiver; LytTr DNA-binding region; KEGG: pen:PSEEN5354 alginate biosynthesis regulatory protein

DNA sequence : 
ATGAATGTCCTGATCGTTGATGACGAACCCCAAGGCCGTGAACGCCTCACCCGGCTGCTCGGCGAACTGGAGGGTTACAC
CGTGCTGGAGCCCAGCGCCACCAACGGCGAGGAGGCCCTGGCGCTGATCGAAAGCCTCAAGCCCGATGTGGTCCTGCTGG
ACATCGGCATGCCAGGCCTGGATGGCCTGCAGGTCGCCGCTCGCCTGTGCGAACGCGAGGCGCCGCCGGCGGTGGTGTTT
TGCACCGGGGACGATGAATACGGTGCCGAGGCATTCAAGGACAGTACCCTCAGCCATGTGACCAAGCCTTTCCAGCCCCA
GGCGTTGCGCGATGCCTTGCGCAAGGCCGAAAAACCCAACCGTGCCCAATTGGCGGCGCTTACCCGGCCAGCCAACGAAG
GTGGTGGCCCACGCAGCCACATCAGTGCCCGTACACGTAAAGGCATCGAATTGATCCCTATACCCCAGGTGATCTATTTC
ATCGCCGACCACAAGTACGTGACCTTGCGCCACGAAGCCGGGGAAGTACTGCTCGATGAGCCACTCAAGGCCCTGGAAGA
CGAGTTTGGCGAACGCTTCGTGCGCATCCACCGCAATGCGTTGGTCGCCCGCGAGCGCATCGAACGCCTGCAGCGCACCC
CGCTGGGGCACTTTCAGCTGTACCTGAAAGGCCTGGACGGCGACGCCCTGACCGTCAGCCGCCGGCATGTGGCTGGGGTG
CGCAAGATGATGCAGACGCTCTGA

Protein sequence : 
MNVLIVDDEPQGRERLTRLLGELEGYTVLEPSATNGEEALALIESLKPDVVLLDIGMPGLDGLQVAARLCEREAPPAVVF
CTGDDEYGAEAFKDSTLSHVTKPFQPQALRDALRKAEKPNRAQLAALTRPANEGGGPRSHISARTRKGIELIPIPQVIYF
IADHKYVTLRHEAGEVLLDEPLKALEDEFGERFVRIHRNALVARERIERLQRTPLGHFQLYLKGLDGDALTVSRRHVAGV
RKMMQTL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00326 YP_008207791.1 Response regulator of the LytR/AlgR family Not tested AbaR25 Protein 1e-43 44
BJAB0868_00330 YP_008211656.1 Response regulator of the LytR/AlgR family Not tested AbaR26 Protein 1e-43 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PputGB1_0210 YP_001666459.1 LytTR family two component transcriptional regulator VFG0119 Protein 1e-88 80