Gene Information

Name : PputGB1_1696 (PputGB1_1696)
Accession : YP_001667935.1
Strain : Pseudomonas putida GB-1
Genome accession: NC_010322
Putative virulence/resistance : Resistance
Product : lipoprotein releasing system, ATP-binding protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 1923024 - 1923722 bp
Length : 699 bp
Strand : +
Note : KEGG: pen:PSEEN3707 lipoprotein releasing system, ATP-binding protein LolD; TIGRFAM: lipoprotein releasing system, ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase

DNA sequence : 
ATGAGTGAGTCGCGCATGAGTGATAAAGCCGTTCTGAGTTGCCGCAACCTGGGCAAGTCCTACGACGAGGGCCCGGAGTC
GGTGCAGGTGCTGTCCGGCCTCAACCTGGAGCTGCACGCCGGTGAGCGTATCGCCATCGTCGGCAGCTCGGGCTCTGGCA
AGAGCACCTTGCTCAACCTGCTGGGTGGCCTCGACCGGCCGACCCAAGGCAGCGTGTGGCTGGCGGGCGAAGAGCTGTCC
GCGCTAGGCGAGCGTGCCCGTGGCCTGCTGCGTAACCGTGAGTTGGGCTTTGTCTATCAGTTTCACCACCTGCTGCCAGA
GTTCACCGCCATCGAGAACGTGTGCATGCCGCTGCTGATCGGCCGCACGCCCATCCCCGAGGCCCGTGAGCGTGCCGAGG
CGCTGCTCAAGCGCGTAGGCCTGGGCCACCGTTTGAACCACAAGCCGGCCGAGCTGTCCGGTGGCGAGCGCCAGCGCGTG
GCGATTGCCCGAGCGCTGGTCAACCGCCCTGGCCTGGTGATGCTCGACGAGCCGACCGGCAACCTCGACCACCATACCGC
TCAGGGCATTCAGGAACTGATGCAGGAGCTGTCCAGCGCCTCGCGCACGGCATTCCTGGTGGTTACCCATGACCTCAACC
TGGCGCGGCAGATGGACCGTGTATTGAAGCTCGACGACGGCCATCTGGTGGCGATCTGA

Protein sequence : 
MSESRMSDKAVLSCRNLGKSYDEGPESVQVLSGLNLELHAGERIAIVGSSGSGKSTLLNLLGGLDRPTQGSVWLAGEELS
ALGERARGLLRNRELGFVYQFHHLLPEFTAIENVCMPLLIGRTPIPEARERAEALLKRVGLGHRLNHKPAELSGGERQRV
AIARALVNRPGLVMLDEPTGNLDHHTAQGIQELMQELSSASRTAFLVVTHDLNLARQMDRVLKLDDGHLVAI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-27 42
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 1e-28 41
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-28 41
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-28 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PputGB1_1696 YP_001667935.1 lipoprotein releasing system, ATP-binding protein NC_008702.1.4606598. Protein 4e-36 45
PputGB1_1696 YP_001667935.1 lipoprotein releasing system, ATP-binding protein NC_012469.1.7686878. Protein 2e-38 44