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Name : PputGB1_1653 (PputGB1_1653) Accession : YP_001667892.1 Strain : Pseudomonas putida GB-1 Genome accession: NC_010322 Putative virulence/resistance : Unknown Product : PAS/PAC sensor-containing methyl-accepting chemotaxis sensory transducer Function : - COG functional category : N : Cell motility COG ID : COG0840 EC number : - Position : 1868767 - 1870332 bp Length : 1566 bp Strand : - Note : TIGRFAM: PAS sensor protein; PFAM: chemotaxis sensory transducer; PAS fold-3 domain protein; PAS fold domain protein; KEGG: pen:PSEEN3758 aerotaxis receptor DNA sequence : ATGCGTAACAACCAGCCGATTACCCAGAGAGAACGGACTTTCCCTGCCCAGCAGCGGTTGATCTCCACCACCAACGCCAA GGGCGTGATCACCTACTGCAACGATGCCTTCATCGAAATCAGCGGTTTCACCCGCGAAGAGCTGACGGGCGCGCCGCACA ACCTGGTACGCCACCCCGACGTGCCGGCTGCAGTGTTTGCCCACATGTGGCAAACCCTCAAGCAGGGCCAGCCATGGATG GGTATCGTCAAGAACCGCTGCAAGTCTGGCGACCATTACTGGGTCAACGCCTACGTCACACCCATCTTCGATAACAACCA AGTTGTCGGCTTCGAGTCGGTGCGAGTCAAACCCACCGCCGAGCAGATCCGTCGCGCCGAAGGCCTGTACCAGCGCATCA ACCAGGGCAAGCCGGCCGTACCTCGCAGGGACAAGTGGCTGCCAGTGCTGCAGGACTGGCTGCCGTTCATCCTCATCAGC CAGGTAGGCTTCCTGATCGGCAACTGGCTGGGCCATTCCTGGGGCTTTGCCCTGGCTGCCGGGCTATCCGTGCCCTTGGG CCTGCTCGGCCTGAGCTGGCAGCAACGCGGCCTCAAGCGCCTGTTGCGTCTGGCCGAACAGACCACTTCCGACCCGCTGA TCGCACAGATGTACACCGACAGCCGTGGCGTGCAGGCGCGCCTGGAAATGGCCATGCTCAGCCAGGATGCCCGCATGAAA ACCTGCCTGACCCGCCTGCAGGACAGTGCCGAGCACCTCAGCGACCAGGCGCGTCAGTCCGATGCCCTGGCGCACAAGAG CTCCTCGGGGCTGGAACGCCAGCGAGTGGAGACCGAGCAGGTTGCCGCTGCGGTAAACCAGATGGCCGCCACCACTCAGG AAGTGGCCAACCACGTGCAGCGTACTGCCGACGCCACCCAGGAAGCCAACCGCCTGACCAGCCAGGGCCGGCAGATTGCC GGGGAAACCCGCGAGGCCATTGAACGCCTGTCGGCGGCGGTGGGCGAAACCGGCCAGACGGTGACGCAACTGGCCAAGGA CAGCGATGAAATTGGTGGCGTGGTCGACGTGATCAAGGGTATCGCCGACCAGACCAACCTGCTGGCGCTGAATGCGGCCA TCGAAGCGGCGCGTGCCGGTGAAATGGGCCGCGGCTTTGCCGTGGTAGCCGATGAAGTGCGCCAGCTGGCCCAGCGCACC GCCGAATCCACCGGGCAGATCCACGGCCTGATCGCCAAGTTGCAACAAACCGCCAGCAATGCCGTGCTGACCATGGAAAC CGGCCACCGCCAGGCGCAGGAAGGTGTCGACCGGGTGATGCAGGCTGACGAAGCATTGGTGGGGATCAGCGAAGCGGTGG CCAACATCACCGACATGGCCACCCAGATTGCCGCAGCGACCGAGGAGCAGACCGCAGTGGCTGACGAAATCAGCCGCAAC ATCAGCACCATTGCCGAACTGGCCGACCAGACCGCCGAGCAGGCGCAGCACTCGGCACTGCTGAGCGAGGAACTGACCAG CACGGCAGGGAGCCAGTATTCGTTGGTGGAGCGGTTCAACCGCTGA Protein sequence : MRNNQPITQRERTFPAQQRLISTTNAKGVITYCNDAFIEISGFTREELTGAPHNLVRHPDVPAAVFAHMWQTLKQGQPWM GIVKNRCKSGDHYWVNAYVTPIFDNNQVVGFESVRVKPTAEQIRRAEGLYQRINQGKPAVPRRDKWLPVLQDWLPFILIS QVGFLIGNWLGHSWGFALAAGLSVPLGLLGLSWQQRGLKRLLRLAEQTTSDPLIAQMYTDSRGVQARLEMAMLSQDARMK TCLTRLQDSAEHLSDQARQSDALAHKSSSGLERQRVETEQVAAAVNQMAATTQEVANHVQRTADATQEANRLTSQGRQIA GETREAIERLSAAVGETGQTVTQLAKDSDEIGGVVDVIKGIADQTNLLALNAAIEAARAGEMGRGFAVVADEVRQLAQRT AESTGQIHGLIAKLQQTASNAVLTMETGHRQAQEGVDRVMQADEALVGISEAVANITDMATQIAAATEEQTAVADEISRN ISTIAELADQTAEQAQHSALLSEELTSTAGSQYSLVERFNR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| VC0512 | NP_230163.1 | methyl-accepting chemotaxis protein | Not tested | VSP-2 | Protein | 2e-67 | 41 |
