Gene Information

Name : PputGB1_1478 (PputGB1_1478)
Accession : YP_001667719.1
Strain : Pseudomonas putida GB-1
Genome accession: NC_010322
Putative virulence/resistance : Virulence
Product : 3-deoxy-manno-octulosonate cytidylyltransferase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG1212
EC number : 2.7.7.38
Position : 1661330 - 1662094 bp
Length : 765 bp
Strand : +
Note : CMP-2-keto-3-deoxyoctulosonic acid synthetase; catalyzes the formation of CMP-3-deoxy-D-manno-octulosonate from CTP and 3-deoxy-D-manno-octulosonate which is incorporated into LPS

DNA sequence : 
ATGAGCCTGAACTTCACCGTGGTGATCCCCGCCCGGCTGCGCTCCACGCGTTTGCCGGGCAAACCGTTGTTGCCGATCGC
CGGCAAGCCGATGGTGCAGCATGTGTGGGAGCAGGCGCGCAGGAGCGGTGCCAGCCGCGTGGTCATCGCCACCGACGACG
CCAGCATCCTCGAAGCTTGCCAGGCCTTTGGCGCCGAAGTGCTGATGACCCGTGCCGACCATGAATCCGGCACCGACCGC
CTGGCTGAAGTGGTCGCGCACCTCGGCCTGCCGGCTGATGCCATCGTGGTCAACGTGCAAGGCGACGAGCCGCTGATCCC
ACCGGTGATCATCGACCAGGTGGCCGCCAACCTGGCAGCCCACCCGGAGGCTGGCATCGCCACCCTGGCCGAGCCGATTC
ATGAGCCGGAAACCGTGTTCAATCCCAATGCGGTCAAGGTGGTGAGCGACAAGAACGGCCTGGCCCTGACCTTCAGCCGT
GCGCCGCTGCCCTGGGCTCGCGATGCCTTTGCCAAGGACCGCAACGTGTTGCCGGAGGGCGTGCCGTATCGCCGTCACAT
CGGCATGTACGCCTACCGCGTCGGCTTCCTGCAGGACTTCGTCAGCTGGGGTCCGTGCTGGCTTGAGCAAACCGAAGCGC
TGGAGCAGCTGCGCGCCCTGTGGCACGGCGTGCGCATTCACGTCGAGGACGCCATCGAGGCGCCTGCCGTGGGCGTGGAT
ACCCCTGAAGACCTGGAGCGCGTAAGGCGCTTGCTGGAGGCCTGA

Protein sequence : 
MSLNFTVVIPARLRSTRLPGKPLLPIAGKPMVQHVWEQARRSGASRVVIATDDASILEACQAFGAEVLMTRADHESGTDR
LAEVVAHLGLPADAIVVNVQGDEPLIPPVIIDQVAANLAAHPEAGIATLAEPIHEPETVFNPNAVKVVSDKNGLALTFSR
APLPWARDAFAKDRNVLPEGVPYRRHIGMYAYRVGFLQDFVSWGPCWLEQTEALEQLRALWHGVRIHVEDAIEAPAVGVD
TPEDLERVRRLLEA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
kpsU YP_854332.1 3-deoxy-manno-octulosonate cytidylyltransferase Not tested PAI I APEC-O1 Protein 1e-39 45
kpsU AAZ04469.1 CMP-KDO synthetase Virulence PAI I APEC-O1 Protein 1e-39 45
kpsU CAE85213.1 KpsU protein Virulence PAI V 536 Protein 7e-40 45