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Name : PputGB1_1179 (PputGB1_1179) Accession : YP_001667423.1 Strain : Pseudomonas putida GB-1 Genome accession: NC_010322 Putative virulence/resistance : Virulence Product : DNA mismatch repair protein MutS Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0249 EC number : - Position : 1336695 - 1339337 bp Length : 2643 bp Strand : - Note : This protein performs the mismatch recognition step during the DNA repair process DNA sequence : ATGGTACAATGCCCCAATTTTGCCCCACCCTTGATCGAAAAACTCGCCAAGCCCTTGATGAATAAAGCAATTTCGGACTT CACCGCACACACACCGATGATGCAGCAGTACTGGAAGCTGAAAAACCAGCACCCAGACCAGCTGATGTTCTACCGCATGG GCGACTTCTACGAAATCTTCTACGAAGATGCGAAAAAAGCCGCGAAACTGCTGGATATCACCTTGACCGCCCGCGGTCAG TCGGCCGGCCAGTCCATTCCCATGTGCGGGATCCCGTTCCATTCGCTCGAAGGCTACCTGGCCAAGCTGGTCAAGCTGGG CGAATCGGTGGTGATCTGTGAGCAGATTGGCGACCCAGCCACCAGCAAGGGCCCGGTGGAGCGCCAGGTGGTGCGCATCA TCACCCCTGGCACGGTCAGTGACGAGGCCCTGCTCGACGAGCGCCGCGACAACCTGATTGCCGCGCTGCTCGGCGACGAG CGCCTGTTCGGCCTGGCCGTACTGGACATCACCAGCGGCAACTTCAGCGTGCAGGAGATCAAGGGCTGGGAAAACCTGCT GGCCGAGCTCGAGCGGCTGAACCCGGTCGAGCTGTTGATCCCGGACGACTGGCCGCGCGATTTGCCTGCGGAGAAACGCC CTGGCGCCCGCCGCCGCGCACCGTGGGACTTCGACCGCGACTCGGCGCGCAAGGCCCTGTGCCAGCAATTCGCGACCAAA GACCTCAAAGGCTTCGGCTGCGACAAGCTGACCCTGGCCATCGGTGCCGCCGGCTGCCTGCTGACCTACGCCAAGGAAAC CCAGCGCACCGCCCTGCCCCACCTGCGCAGCCTGCGCCACGAGCGCCTGGACGACACGGTCATCCTCGATGGCGCCAGCC GCCGCAACCTGGAGCTGGACATCAACCTGGCCGGCGGGCGCGACAACACCCTTCAGTCGGTGATCGACCGCTGCCAGACC GCCATGGCCAGCCGCCTGCTGAGCCGCTGGCTGAACCGCCCGCTGCGCGACCTCAAGGTACTGCAGGCACGCCAGGATTC GATCCGCTGCCTGCTCGACAGCTATCGCTTCGAGAAGCTGCAGCCGCAGTTGAAGGAAATTGGCGATATCGAGCGGATCC TCGCTCGCATCGGCCTGCGCAATGCCCGCCCGCGCGACCTGGCGCGCCTGCGTGATGCCTTGGGCGCATTGCCCGAGCTG CAGAACGCCATGACCGAGCTCGAGGCACCGCACCTTGCGCGCCTGGCAGCCATCACCGGCACCTACCCGGAACTGGCCAG CCTGCTGGAGCGGGCGATCATCGACAACCCGCCGGCGGTGATCCGCGACGGCGGCGTGCTCAAGGCCGGCTATGACAATG AGCTGGACGACCTGCTGGCGATCAGCGAAAACGCCGGCCAGTTCCTGATCGACCTGGAAGCCCGGGAAAAGGCTCGCACA GGCCTTGCCAACCTCAAGGTCGGCTACAACCGCGTGCACGGCTACTTCATCGAGCTACCGACCAAGCAGGCCGAGCAGGC CCCAGGCGACTACATTCGCCGGCAGACGCTCAAGGGCGCCGAGCGCTTCATCACCCCGGAGCTGAAGGCATTCGAGGACA AGGCACTGTCGGCCAAGAGCCGCGCCCTGGCCCGCGAAAAAATGCTGTACGACGCCCTGCTGGAAACCCTCATCAGCCAC CTGGCGCCGCTGCAGGACAGCGCCGCTGCCCTGGCCGAACTGGATGTACTCAGCAACCTGGCCGAACGTGCACTGAACCT TGACCTGAACTGCCCGCGCTTCGTCGACGAGCCGTGCCTGCGCATCGTGCAAGGCCGCCACCCGGTGGTGGAGCAGGTAT TGACCACGCCGTTCGTGGCCAACGACCTGGGCCTGGACAACAGCACACGCATGCTGATCATCACTGGCCCGAACATGGGC GGTAAGTCCACCTACATGCGCCAGACCGCCTTGATCGTGCTGCTGGCACACATTGGCAGCTTCGTGCCGGCGGCCAGCTG CGAGCTGTCGCTGGTCGACCGCATTTTCACCCGCATCGGTTCCAGCGATGACCTGGCCGGCGGGCGCTCGACGTTCATGG TCGAGATGAGCGAAACCGCCAACATTCTGCATAACGCCACCGACCGCAGCCTGGTGCTGATGGACGAAGTCGGCCGCGGC ACCAGCACCTTCGACGGCTTGTCGCTGGCCTGGGCCGCCGCCGAGCGCCTGGCCCAGCTGCGTGCCTACACGCTGTTTGC CACGCACTACTTCGAACTGACCGTGCTGCCGGAGAGCGAGCCGCTGGTGGCCAACGTGCACCTGAACGCCACCGAGCACA ACGAACGCATCGTTTTCCTGCACCACGTGCTGCCTGGCCCTGCCAGCCAGAGTTACGGCCTGGCCGTGGCGCAACTGGCC GGCGTACCGACAGTGGTCATCCAGCGTGCCCGCGAACACCTGGGGCGCCTGGAAACCACCAGCCTGCCGCACGAGCAGCC CCCGGCCGCAAAAGCCAAGGATGCGCCGCAGGTACCGCACCAAAGCGACCTGTTCGCCAGCCTGCCACACCCGGCCATCG AGAAGCTGGGCAAGCTGCAGCTGGACGACATGACCCCGCGTCAAGCTATCGAAATGCTATATCAACTAAAGAACCTGTTA TAA Protein sequence : MVQCPNFAPPLIEKLAKPLMNKAISDFTAHTPMMQQYWKLKNQHPDQLMFYRMGDFYEIFYEDAKKAAKLLDITLTARGQ SAGQSIPMCGIPFHSLEGYLAKLVKLGESVVICEQIGDPATSKGPVERQVVRIITPGTVSDEALLDERRDNLIAALLGDE RLFGLAVLDITSGNFSVQEIKGWENLLAELERLNPVELLIPDDWPRDLPAEKRPGARRRAPWDFDRDSARKALCQQFATK DLKGFGCDKLTLAIGAAGCLLTYAKETQRTALPHLRSLRHERLDDTVILDGASRRNLELDINLAGGRDNTLQSVIDRCQT AMASRLLSRWLNRPLRDLKVLQARQDSIRCLLDSYRFEKLQPQLKEIGDIERILARIGLRNARPRDLARLRDALGALPEL QNAMTELEAPHLARLAAITGTYPELASLLERAIIDNPPAVIRDGGVLKAGYDNELDDLLAISENAGQFLIDLEAREKART GLANLKVGYNRVHGYFIELPTKQAEQAPGDYIRRQTLKGAERFITPELKAFEDKALSAKSRALAREKMLYDALLETLISH LAPLQDSAAALAELDVLSNLAERALNLDLNCPRFVDEPCLRIVQGRHPVVEQVLTTPFVANDLGLDNSTRMLIITGPNMG GKSTYMRQTALIVLLAHIGSFVPAASCELSLVDRIFTRIGSSDDLAGGRSTFMVEMSETANILHNATDRSLVLMDEVGRG TSTFDGLSLAWAAAERLAQLRAYTLFATHYFELTVLPESEPLVANVHLNATEHNERIVFLHHVLPGPASQSYGLAVAQLA GVPTVVIQRAREHLGRLETTSLPHEQPPAAKAKDAPQVPHQSDLFASLPHPAIEKLGKLQLDDMTPRQAIEMLYQLKNLL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| mutS | AAA80578.1 | DNA mismatch repair protein | Virulence | SPI-1 | Protein | 0.0 | 56 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| PputGB1_1179 | YP_001667423.1 | DNA mismatch repair protein MutS | VFG0562 | Protein | 0.0 | 59 |
