Gene Information

Name : PputGB1_1046 (PputGB1_1046)
Accession : YP_001667292.1
Strain : Pseudomonas putida GB-1
Genome accession: NC_010322
Putative virulence/resistance : Virulence
Product : general secretion pathway protein G
Function : -
COG functional category : N : Cell motility
COG ID : COG2165
EC number : -
Position : 1195021 - 1195455 bp
Length : 435 bp
Strand : +
Note : TIGRFAM: general secretion pathway protein G; PFAM: type II secretion system protein G; KEGG: pen:PSEEN4278 type II secretion system protein G

DNA sequence : 
ATGCAGCATCGACGTAATCGCCAACGCGGTTTTACCCTCATGGAGATCATGGTGGTGATCTTCATCATCGGCCTGCTGAT
TGCCGTGGTTGCACCCAGCGTGCTGGGCAACCAGGACAAGGCCATGAAGCAGAAGGTGATGGCCGACCTGGCTACCCTGG
AGCAAGCGCTGGACATGTATCGGCTGGACAACCTGCGCTTTCCCAGCAGTGAACAGGGCCTGGCCGCGCTGGTGAAAAAG
CCGGCCCAGGAGCCGCTGCCACGGGCCTGGCGCAGTGACGGCTATGTACGCCGCCTGCCGCAAGACCCGTGGGGCACCCC
TTACCAGTACCGTATGCCGGGCGAGCATGGCCGGGTCGATGTGTACTCGCTGGGCGCCGATGGCCAACCGGGCGGCGAAG
GTCAGGACGCCGACCTGGGCAACTGGGCGCTGTAA

Protein sequence : 
MQHRRNRQRGFTLMEIMVVIFIIGLLIAVVAPSVLGNQDKAMKQKVMADLATLEQALDMYRLDNLRFPSSEQGLAALVKK
PAQEPLPRAWRSDGYVRRLPQDPWGTPYQYRMPGEHGRVDVYSLGADGQPGGEGQDADLGNWAL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
gspG YP_854404.1 type II secretion protein GspG Not tested PAI I APEC-O1 Protein 3e-38 55
gspG CAE85231.1 GspG, hypothetical type II secretion protein Not tested PAI V 536 Protein 2e-38 55

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PputGB1_1046 YP_001667292.1 general secretion pathway protein G VFG2050 Protein 7e-39 55
PputGB1_1046 YP_001667292.1 general secretion pathway protein G VFG0180 Protein 7e-37 54
PputGB1_1046 YP_001667292.1 general secretion pathway protein G VFG1871 Protein 2e-34 50