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Name : PputGB1_1045 (PputGB1_1045) Accession : YP_001667291.1 Strain : Pseudomonas putida GB-1 Genome accession: NC_010322 Putative virulence/resistance : Virulence Product : general secretion pathway protein F Function : - COG functional category : N : Cell motility COG ID : COG1459 EC number : - Position : 1193801 - 1195003 bp Length : 1203 bp Strand : + Note : TIGRFAM: general secretion pathway protein F; PFAM: type II secretion system protein; KEGG: pen:PSEEN4279 type II secretion system protein F DNA sequence : ATGCCGACCTATCGCTACCAGGCCGTGGACCTCGCGGGCAAATCGCACAAGGCCAGCCTGCAGGCTGACAATGAGCGCCA CGCCCGCCAGCTGTTGCGCGAGCAGGGCCTGTTTGCCCGCCAGTTGCAGCGCCACGAAGCCGGTGTCCAGCGACCCCGGC GCCAGCGGCTTAGCCGCGCCCAGCTGTGTGAATTGACCCGTCAACTGGCCACCTTGATCGGGGCCGGCATCCCCTTGGTC GATGCCCTGGCCACCCTGGAACGGCAACTGCGCCAGCCCGCCTTGCACAGTGTGCTGGTGGCCCTGCGCGGCTCGCTTGC CGAAGGCCTGGGCCTGGCTCGCAGCCTGGCTCGGCAGGGCGCACCTTTCACTGGCCTGTACTGCGCGCTGGTCGAGGCTG GCGAACGTTCCGGGCGCCTGGCCCAGGTGCTGACCCGCTTGGCCGATCATTTGGAACAGGTGCAACGGCAGCAGCACAAG GCCCGCACTGCGCTGATCTACCCCACGGTACTGATGGGGGTGTCGCTTGCCGTGGTCATCGGCCTGATGACATTCGTCGT GCCCAAACTCACCGAACAATTTGCCCATGCCGGGCAGAGCCTGCCACTGATCACCTCGTTGCTGATTGGCCTGAGCCAGG GCTTGGTGCTGGCAGGGCCGTGGATGGTAGGGCTGGCGCTGATGCTCGCCGTGCTGGGTGGCTGGTTGCTGCGCAAGCCG CATTGGTGTCTGCGCCGCGACCAACTGCTGTTGCGCCTGCCGCGCATCGGCGGCCTGGTGCAGGTGCTGGAAAGCGCACG CCTGGCACGCAGCCTGGCGATTCTCAGTGGCAGCGGCGTGGCCCTGCTCGAAGCCTTGCACGTGGCCACCGACACCATCG GCAACCGGCGTATCCGCCTGGCCATGGAGCAGGTACGCCAGCAAGTGCAGGGCGGCACCAGCCTGCACCGTGCGCTGGAT GCCTGCCAGCAATTCCCGCCGCTGCTGGTGAACATGGTCGGCAGCGGCGAGGCCAGCGGCACCCTGGCCGACATGCTCGA GCGTGTGGCCGACGACCAGGAGCGCGGCTTTGCCCGCCAGGTGGATACCGCCATGGCGCTGTTCGAACCCCTGATGATTC TGGTGATGGGCGCCGTGGTGCTGTTCATCGTGCTGGCGGTGCTGCTGCCGATCATGCAACTCAACCAGGGCCTGCAACTG TGA Protein sequence : MPTYRYQAVDLAGKSHKASLQADNERHARQLLREQGLFARQLQRHEAGVQRPRRQRLSRAQLCELTRQLATLIGAGIPLV DALATLERQLRQPALHSVLVALRGSLAEGLGLARSLARQGAPFTGLYCALVEAGERSGRLAQVLTRLADHLEQVQRQQHK ARTALIYPTVLMGVSLAVVIGLMTFVVPKLTEQFAHAGQSLPLITSLLIGLSQGLVLAGPWMVGLALMLAVLGGWLLRKP HWCLRRDQLLLRLPRIGGLVQVLESARLARSLAILSGSGVALLEALHVATDTIGNRRIRLAMEQVRQQVQGGTSLHRALD ACQQFPPLLVNMVGSGEASGTLADMLERVADDQERGFARQVDTAMALFEPLMILVMGAVVLFIVLAVLLPIMQLNQGLQL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspF | YP_854405.1 | type II secretion protein GspF | Not tested | PAI I APEC-O1 | Protein | 3e-50 | 41 |
| gspF | CAE85232.1 | GspF, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 3e-49 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| PputGB1_1045 | YP_001667291.1 | general secretion pathway protein F | VFG0181 | Protein | 8e-55 | 43 |
