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Name : PputGB1_1044 (PputGB1_1044) Accession : YP_001667290.1 Strain : Pseudomonas putida GB-1 Genome accession: NC_010322 Putative virulence/resistance : Virulence Product : type II secretion system protein E Function : - COG functional category : N : Cell motility COG ID : COG2804 EC number : - Position : 1192349 - 1193797 bp Length : 1449 bp Strand : + Note : PFAM: type II secretion system protein E; KEGG: pen:PSEEN4280 type II secretion system protein E DNA sequence : ATGCTGCCCTATCGCCAGGCACGGCTGAGCGGGGTGGCCATGGCTGCGACGGAGCAGGGTTGGCAGTTGTGGCTAAGGAC CGACGCCGACAGCGCGCAGTTGCAGGAGCTGTTGCGCGTGCATGGCCAACCCTGCGCGCTTGAATACCTGGAGCCCGCAG TATTCGATGAGCGCTTGGGCCAGCTGTACCAGGCCGGCGATGCGGCCACTGCAGCGCTGATCGAAGGGATTGGCGACCAG GTCGACCTGGACAGCCTGATGAGCGAGATGCCGCGCATCGAAGACTTGCTGGAAAGCGACGACGAAGCCCCGGTAATCCG CTTGATCAACGGCCTGTTCGGCCAGGCGCTGCGCCTGCGTGCCTCGGACATTCATATCGAGACGTTCGAACAAAGCCTGG TGGTGCGCCTGAGGGTCGATGGCCACCTGCGCGAAGTGCTGCGCCCGCCGCGAGCGTTGTCGGCGATGCTGGTGTCACGG ATCAAGGTCATGGCCCGCCTGGACATCGCAGAAAAACGCCAGCCCCAGGATGGGCGCATCACTTTGCGCGCGGCGGGACG CGAAGTGGACGTGCGGGTCTCGACCTTGCCCGGCATCCATGGCGAGCGGGTGGTGATGCGGGTACTCGACAAGCAGGCCA GCCTGTTGGCGCTGGAAAACCTGGGCATGCCGGCGGCGGTGTTGCAGGGCCTGCGCAGCTGCCTGGCGCGGCCCAACGGT ATCGTGTTGTCCACTGGGCCAACCGGTTCGGGCAAGACCACCACCCTGTACGCCAGCCTCAACAGCCTCAACGACGGCAG CCGCAACATCCTCACCGTTGAGGACCCGGTGGAGTATGCCATCGCAGGCATTGGCCAGACCGCCATCAACCCGCGTGCCG GGCTGACGTTCGCCAGTGGCCTGCGCGCCATCCTGCGTCAGGACCCGGACGTGATCATGCTCGGCGAAATCCGCGACCAG GAGACCGCACAGATCGCCGTGCAGGCCAGCCTCACCGGCCATCTGGTGCTCTCTACCCTGCACACCAACAGTGCCGTGGG CGCGGTGACCCGGCTACGTGACATGGGTATCGAGCCGTTCCTGATTGCCTCGTGTCTGCGCGGTGTACTGGCCCAGCGCC TGGTGCGGCGCTTGTGCAGTTGTGCCGTGGCGCACCCATTGCAACCGGCCGAGCGTGACCTGTGGCCAGAGCTGGCTGCA CTGGGCAGCAGTTACCACGCGGTCGGCTGCGAGCAGTGCCAGGGCAGCGGATACATCGGCCGCCTGGGCCTGTACGAATT CATCGAACTGGACGCCGGGCTGATCGGCCTGTTGTATGACGGCGCCAGCGAACTGGCCATGCAGGCCTACCTCGGTGAGC GCCGGCAAAGCCTGGTGGCGATGGCCAGCGAGTGCCTGGCCCGTGGCGAGACCAGCCTGGCCGAAGTGCTGCGCGCGGTG CAGGGCTAA Protein sequence : MLPYRQARLSGVAMAATEQGWQLWLRTDADSAQLQELLRVHGQPCALEYLEPAVFDERLGQLYQAGDAATAALIEGIGDQ VDLDSLMSEMPRIEDLLESDDEAPVIRLINGLFGQALRLRASDIHIETFEQSLVVRLRVDGHLREVLRPPRALSAMLVSR IKVMARLDIAEKRQPQDGRITLRAAGREVDVRVSTLPGIHGERVVMRVLDKQASLLALENLGMPAAVLQGLRSCLARPNG IVLSTGPTGSGKTTTLYASLNSLNDGSRNILTVEDPVEYAIAGIGQTAINPRAGLTFASGLRAILRQDPDVIMLGEIRDQ ETAQIAVQASLTGHLVLSTLHTNSAVGAVTRLRDMGIEPFLIASCLRGVLAQRLVRRLCSCAVAHPLQPAERDLWPELAA LGSSYHAVGCEQCQGSGYIGRLGLYEFIELDAGLIGLLYDGASELAMQAYLGERRQSLVAMASECLARGETSLAEVLRAV QG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspE | CAE85233.1 | GspE, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 9e-107 | 57 |
| gspE | YP_854406.1 | type II secretion protein GspE | Not tested | PAI I APEC-O1 | Protein | 1e-106 | 57 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| PputGB1_1044 | YP_001667290.1 | type II secretion system protein E | VFG0182 | Protein | 8e-105 | 58 |
| PputGB1_1044 | YP_001667290.1 | type II secretion system protein E | VFG2048 | Protein | 6e-106 | 57 |
| PputGB1_1044 | YP_001667290.1 | type II secretion system protein E | VFG1876 | Protein | 3e-109 | 50 |
| PputGB1_1044 | YP_001667290.1 | type II secretion system protein E | VFG2426 | Protein | 8e-66 | 48 |
| PputGB1_1044 | YP_001667290.1 | type II secretion system protein E | VFG1880 | Protein | 7e-68 | 46 |
| PputGB1_1044 | YP_001667290.1 | type II secretion system protein E | VFG0112 | Protein | 1e-70 | 41 |
