Gene Information

Name : Teth39_0342 (Teth39_0342)
Accession : YP_001664347.1
Strain : Thermoanaerobacter pseudethanolicus ATCC 33223
Genome accession: NC_010321
Putative virulence/resistance : Virulence
Product : ATPase
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG0542
EC number : -
Position : 384438 - 386888 bp
Length : 2451 bp
Strand : +
Note : PFAM: UvrB/UvrC protein; AAA ATPase, central domain protein; Clp N terminal domain protein; ATPase associated with various cellular activities, AAA_5; ATPase AAA-2 domain protein; SMART: AAA ATPase

DNA sequence :
ATGGCGATGTTTGGAAGATTTACAGAAAGAGCTCAAAAAGCTCTTTATTTGGCTCAAGAGGAAGCGAGGTCTTTTTATCA
TAACTATGTAGGGACAGAACACATTTTATTAGGATTGTTAAAAGAAGATGAAGGAATTGCAGCAAGAGTTTTAAAAAAAC
TGGGAGTAACTTATGAAACTACAAGAGAGAAGGTATTGTCTTTGATTGGAATGGGAAATATTCCAGGAGACGTGGTAGGT
TATACACCACGAGCTAAAAGGGTATTGGAATTGAGTCTTAGTGAGGCAAGGAGATTTAATACCAGCTATGTAGGGACAGA
GCATATTTTGTTAGGACTTTTAAGAGAAGGCGAAGGAGTTGCTGTAAGAATTTTAATGGAACAAGGTATAGATTTCAATA
GGGTGAGAGAGGAGATTGTAAAAATGCTTAATGAAGAGCCTGCAGGAGGACCTGCAAAGGCTGCAAAAGTTAAAAATACC
AATACACCTACTTTAAATCAATTTGGAAGAGATTTAACTGAGCTTGCAAGAGACGGCAAACTTGACCCTGTAATAGGAAG
AGAAAAAGAGATTGAAAGAGTTATACAAATCTTAAGCAGAAGGACAAAGAATAACCCTGTCCTAATAGGTGAACCGGGTG
TCGGTAAAACTGCTATTGTAGAAGGTCTTGCGCAAAAGATTGTAGAAGGAGAAATTCCTGAAATTTTGAAAGATAAAAGA
GTTGTAACTTTAGACATGGCTTCTATGGTAGCAGGTACAAAGTACAGAGGCGAATTTGAAGATAGGTTAAAAACAGTATT
AAATGAGGTTATAAAGGCAGGAAATGTGATACTATTTATAGATGAGATGCACACTTTGATAGGAGCAGGTGCAGCAGAGG
GTGCAATAGATGCATCAAATATTCTAAAACCGGCACTTGCAAGAGGTGAAATTCAAGTAGTTGGAGCTACTACTTTGGAT
GAGTACAGAAAATATGTAGAAAGAGACCCTGCATTAGAGAGACGATTCCAACCAATAATTGTAGATGAACCAACTGTGGA
GGAGACTATTGAGATATTAAAGGGCTTGAGAGATAAGTATGAAGCCCATCATAGGGTTAAAATTACTGACGAAGCTTTAG
AAGCAGCAGCTAGACTTTCTCACAGATATATTGCAGATAGATTTTTACCTGATAAAGCTATAGACTTAATAGATGAAGCA
GCTTCTCGCGTAAGACTAAAGACAGTGACAGCTCCTCCAGAGATAAAAGAACTGGAAGATAAAATCAATGACCTTATAAA
AGAGAAGGAAGAAGCGATAAGAACTCAAGAATACGAAAAAGCTGCAAAAATAAGAGATGAAGAACAAAAATTGAGAGAAG
AATTAGAAAAATTAAAAGCTAAATGGCAACAAAATTCTCTTTCTAATGAAAAAAGTGTAGGACCTGAAGAAATCGCACAA
GTCGTATCTCTGTGGACAGGAATACCTGTTAAAAAGTTAGCTGAAGAGGAATCAGAGAGATTGCTCCACTTAGAGGAGGT
ATTGCATGAAAGAGTTATAGGACAAGATGAAGCAGTAGAAGCAGTGGCAAGAGCTATAAGAAGGGCAAGAGTAGGCTTAA
AAGATCCAAAAAGGCCAATAGGTTCATTTATCTTCTTGGGGCCTACTGGTGTTGGTAAAACAGAACTTACAAAGGCTTTG
GCAGAAGCTCTTTTTGGTGACGAAAATGCTATGATTAGGCTTGATATGTCAGAATACATGGAAAGACACACCGTTTCTAA
ACTTATTGGTTCACCTCCAGGATATGTAGGATTTGAAGAAGGAGGACAATTAACAGAAAAAGTAAGAAGAAAACCCTATT
CAGTAATCTTGCTGGATGAAATTGAAAAAGCGCATCCTGACGTGTTTAACATTCTCCTTCAAATATTAGAAGATGGACGA
CTCACAGATTCAAAAGGTAGAACTGTAGACTTTAAAAATACCGTTATAATCATGACATCAAACGTGGGAGCAGAACTTTT
GAAAAAGCAATCTACTTTAGGATTTATGCCTCAAGAAAAAGAAGACAAAGCCTCTTATGACAAAATAAAAGAAACATTGA
TGGCAGAGTTGAGAAAGACCTTTAGACCTGAATTCTTAAATAGGGTGGATGAGATAATTGTATTTCATCAACTCTCAAAA
GAAGATATTGAAAAGATTGCTGATATAATGATTAAAGAATTGAATGACAGACTAAAAGAGAACGACATTAAACTGGACTT
TACTCCTGAAGCCAAAGAGGAAATTATCAAACAGGGATATGACCCCAACTACGGTGCAAGGCCTTTAAGAAGAGTTATAC
AAAGAATTGTAGAGAATCAACTGTCTGAACTTATGTTGCAAGGAGAAGTGAAGCCAGGAGATGAACTTATTGTAACTGCA
AAAGACGGAAAAATAGAGTTTGTGAAAAAGGACGCTATAAAAAAGGCTTAG

Protein sequence :
MAMFGRFTERAQKALYLAQEEARSFYHNYVGTEHILLGLLKEDEGIAARVLKKLGVTYETTREKVLSLIGMGNIPGDVVG
YTPRAKRVLELSLSEARRFNTSYVGTEHILLGLLREGEGVAVRILMEQGIDFNRVREEIVKMLNEEPAGGPAKAAKVKNT
NTPTLNQFGRDLTELARDGKLDPVIGREKEIERVIQILSRRTKNNPVLIGEPGVGKTAIVEGLAQKIVEGEIPEILKDKR
VVTLDMASMVAGTKYRGEFEDRLKTVLNEVIKAGNVILFIDEMHTLIGAGAAEGAIDASNILKPALARGEIQVVGATTLD
EYRKYVERDPALERRFQPIIVDEPTVEETIEILKGLRDKYEAHHRVKITDEALEAAARLSHRYIADRFLPDKAIDLIDEA
ASRVRLKTVTAPPEIKELEDKINDLIKEKEEAIRTQEYEKAAKIRDEEQKLREELEKLKAKWQQNSLSNEKSVGPEEIAQ
VVSLWTGIPVKKLAEEESERLLHLEEVLHERVIGQDEAVEAVARAIRRARVGLKDPKRPIGSFIFLGPTGVGKTELTKAL
AEALFGDENAMIRLDMSEYMERHTVSKLIGSPPGYVGFEEGGQLTEKVRRKPYSVILLDEIEKAHPDVFNILLQILEDGR
LTDSKGRTVDFKNTVIIMTSNVGAELLKKQSTLGFMPQEKEDKASYDKIKETLMAELRKTFRPEFLNRVDEIIVFHQLSK
EDIEKIADIMIKELNDRLKENDIKLDFTPEAKEEIIKQGYDPNYGARPLRRVIQRIVENQLSELMLQGEVKPGDELIVTA
KDGKIEFVKKDAIKKA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
clpC YP_005163377.1 ATP-dependent Clp protease ATP-binding subunit Not tested Not named Protein 0.0 57
STY0294 NP_454876.1 ClpB-like protein Not tested SPI-6 Protein 2e-95 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Teth39_0342 YP_001664347.1 ATPase VFG0079 Protein 0.0 64
Teth39_0342 YP_001664347.1 ATPase VFG0080 Protein 1e-149 55