Gene Information

Name : Teth39_1385 (Teth39_1385)
Accession : YP_001665373.1
Strain : Thermoanaerobacter pseudethanolicus ATCC 33223
Genome accession: NC_010321
Putative virulence/resistance : Unknown
Product : integrase catalytic subunit
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2826
EC number : -
Position : 1425014 - 1425940 bp
Length : 927 bp
Strand : -
Note : PFAM: Integrase, catalytic region

DNA sequence :
ATGGTTCATAATAATGATACCACAAAAAATCGTTCTTTTAAACACTTAAGTAGCTATGAACGAGGAGAGATCTATGCATT
ACTCAAAGAAGGAAGAAGTATTCGGTATATTGCTAAAAAACTTAATCGATCTCCAAGCACTATAAGCCGTGAAATTAAAC
GTGGAACTACTACACAACTTAGAAGTGATTTATCTTCTTATACAAGCTATTTTCCTGAAACCGGTCAAGCTATCTACGAA
AAAAATCGTTCAAATTGCGGAGCTAAATTTAAAGTAGCTAAAGCAGAAGATTTCTTGAAATATGCTGAAAATAAAATATT
AAATGAAAAATGGTCACCAGATGCAGTTGTAGGCTATTGTAAAAAAGACCCAAGCTGGAATAATAAAACCATTGTTTGTA
CTAAAACACTGTACAACTATATAGATAGAGGATTATTAAAAGTTAAAAACATTGATTTACCTTTAAAACTACGTTTAAAA
GCAAGGAAGAAACAAAACCGTAAAAATAAACGTATTATGGGTAAAAGTATTGATTTTAGGCCTAAAGAAGTTGAAAGCCG
TGAAGTTTTTGGGCATTGGGAAATAGATACGTTAATTGGCAAGAAGTCTAATGACAAGGTCCTTTTAACATTAATAGAGC
GTAAGACTCGCCATGAAATAATATTACTATTGGATACAAAAGACAGTAAATCTGTTAAAGATGCACTATCAAAATTAAAA
GATATGTTTGGTGACAATTTAAACAAAGTATTTAAAACAATAACATCTGATAATGGTACAGAGTTTAGTGATTTAGAAAG
TGCTCTTAAGGAATATGGCATAGAAGTATATTATACACATCCATATTCATCTTGGGAAAGAGCTAAAAATGAACGACATA
AGACACCTAAAGAATACTTTTATGAGGAGCTGGCAAAAATCTGTTAA

Protein sequence :
MVHNNDTTKNRSFKHLSSYERGEIYALLKEGRSIRYIAKKLNRSPSTISREIKRGTTTQLRSDLSSYTSYFPETGQAIYE
KNRSNCGAKFKVAKAEDFLKYAENKILNEKWSPDAVVGYCKKDPSWNNKTIVCTKTLYNYIDRGLLKVKNIDLPLKLRLK
ARKKQNRKNKRIMGKSIDFRPKEVESREVFGHWEIDTLIGKKSNDKVLLTLIERKTRHEIILLLDTKDSKSVKDALSKLK
DMFGDNLNKVFKTITSDNGTEFSDLESALKEYGIEVYYTHPYSSWERAKNERHKTPKEYFYEELAKIC

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CPR_0379 YP_697708.1 IS1470, transposase Not tested Not named Protein 5e-50 48
CPR_1088 YP_698410.1 IS1470, transposase Not tested Not named Protein 1e-48 48
CPR_0648 YP_697974.1 IS1470, transposase Not tested Not named Protein 4e-49 48
CPR_0628 YP_697955.1 IS1470, transposase Not tested Not named Protein 1e-49 48
CPR_0383 YP_697712.1 IS1470, transposase Not tested Not named Protein 1e-49 48
CPR_1078 YP_698400.1 IS1470, transposase Not tested Not named Protein 9e-50 48
CPR_0321 YP_697650.1 IS1470, transposase Not tested Not named Protein 8e-50 48
CPR_0659 YP_697986.1 IS1470, transposase Not tested Not named Protein 4e-43 47
CPR_0314 YP_697643.1 IS1470, transposase Not tested Not named Protein 2e-49 47
CPR_0967 YP_698290.1 IS1470, transposase Not tested Not named Protein 2e-49 47