Gene Information

Name : Teth39_1067 (Teth39_1067)
Accession : YP_001665058.1
Strain : Thermoanaerobacter pseudethanolicus ATCC 33223
Genome accession: NC_010321
Putative virulence/resistance : Virulence
Product : type II secretion system protein E
Function : -
COG functional category : N : Cell motility
COG ID : COG2804
EC number : -
Position : 1129175 - 1130851 bp
Length : 1677 bp
Strand : +
Note : PFAM: type II secretion system protein E; General secretory system II, protein E domain protein; SMART: AAA ATPase

DNA sequence :
ATGGCCAAGAAAAAGCTAGGGGAGCTTTTACTTGAGGTAGGGCTTATAACAGAAGAACAATTAAAGCACGCAATAGAAGT
TCAAAACAAAACAGGAGAAAAGTTAGGAAAAGTTCTTATTAAATTGGGGTATGTTACAGAAAGCCAAATACTAGAGGCTT
TAGAATTTCAATTAGGTATTCCACATGTAGATTTGCAAAAATACTATATTGATCCCGATGTAGCAAAATTAATTCCTGAA
GCCGTTGCTAAAAGACATACTATTATTCCTATAAAAAAAGATGAAGATGGTATATTGGTAGCAATGGCAGACCCTCTGAA
TATTTTTGCACTAGATGATGTGAGAATCATTACGAAACAAAATGTAAAGCCTTTAATTGCTTCTGAAGGAAGCATCTTAA
AAGCCATAGATAGAATTTACGGAAGAGAACAGGCAGAAAAAGCAGTACAGGATTTTAAAAAGGAGTTTCAAAGTGAAAGT
CAAGAAGAGCTGCCAGATGAGATTCTTGAAGAAGTACAAAACGCGCCTGCTGTACGCTTTGTAAATTCTATAATTGAGCA
GGCAATAAAAAATAGGGCTTCAGATATTCACATTGAACCTACTGAAAAAGACCTTAGAATTCGATTTAGGATAGATGGAC
AATTAACAGAAGCTATGAGGACTATAAAAAGTACCCATGCCCCTGTTGTGACAAGAGTAAAAATTATGGCTAATATGAAC
ATCGCTGAAAGAAGACTTCCTCAAGATGGCAGATTTGATTTTACTACAGGTGGTAAAAATATTGACATAAGAGTTTCTTC
GTTGCCCACTGTTTTTGGAGAGAAATTGGTATTGAGGCTTTTAGACAAGGAAAATTTTATAATGACAAAGGAGCAATTAG
GTTTTGAAGAAGAGGATCTGGTGCTCTTTGATAAACTTATCAAAAGGCCTAATGGCATTGTGCTTTTGACTGGTCCTACA
GGTAGTGGGAAAACCACCACTCTTTATGCAATGCTGAGAGAGCTTAACAAACCCAATATTAATATAATAACTGTTGAGGA
CCCTGTTGAGTATTCCCTTGAGGGAATAAACCAGGTACAAGTTAATGAAAAGGCAGGCCTTACCTTTGCGACTGCTCTTA
GGTCAATTTTGAGGCAAGACCCTGATATAATTATGATTGGAGAAATTAGAGATACTGAAACTGCTGAGATAGCTATTCGC
TCTGCCATAACAGGGCACTTAGTCCTTTCCACTTTGCATACAAATGATGCGGCGGGAGCGGTGACTAGGCTTGTAGATAT
GGGTATAGAGCCTTATCTTGTGTCTTCTTCTGTAGTAGGGGTTATTGCTCAGAGATTGGCGAGAAAAATATGTGATAACT
GTAGAATTTCTTATAAAGCTTCCAAAGGCGAAAAAGAGCTATTGGGAATTTCAGAAAATGAAGACATTACTTTATACAAG
GGGAGAGGGTGCCCTGTTTGTAATAAAACAGGCTATAGGGGAAGAATTCCTATATATGAGATAATGACTGTTACTTCTGA
TATTAGAGAGCTTATAAATGCTAAGGTTTCCTCTGATGTTATTGGAGCTCAGGCTGTAAAAAATGGCATGAAAACTTTAC
GAGAAAGTGCTAAAAGACTTGTATTACAAGGAAAAACTACAATTGATGAAATGATAAGACTAACTTACGAGGAATGA

Protein sequence :
MAKKKLGELLLEVGLITEEQLKHAIEVQNKTGEKLGKVLIKLGYVTESQILEALEFQLGIPHVDLQKYYIDPDVAKLIPE
AVAKRHTIIPIKKDEDGILVAMADPLNIFALDDVRIITKQNVKPLIASEGSILKAIDRIYGREQAEKAVQDFKKEFQSES
QEELPDEILEEVQNAPAVRFVNSIIEQAIKNRASDIHIEPTEKDLRIRFRIDGQLTEAMRTIKSTHAPVVTRVKIMANMN
IAERRLPQDGRFDFTTGGKNIDIRVSSLPTVFGEKLVLRLLDKENFIMTKEQLGFEEEDLVLFDKLIKRPNGIVLLTGPT
GSGKTTTLYAMLRELNKPNINIITVEDPVEYSLEGINQVQVNEKAGLTFATALRSILRQDPDIIMIGEIRDTETAEIAIR
SAITGHLVLSTLHTNDAAGAVTRLVDMGIEPYLVSSSVVGVIAQRLARKICDNCRISYKASKGEKELLGISENEDITLYK
GRGCPVCNKTGYRGRIPIYEIMTVTSDIRELINAKVSSDVIGAQAVKNGMKTLRESAKRLVLQGKTTIDEMIRLTYEE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
gspE YP_854406.1 type II secretion protein GspE Not tested PAI I APEC-O1 Protein 3e-102 52
gspE CAE85233.1 GspE, hypothetical type II secretion protein Not tested PAI V 536 Protein 2e-102 52

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Teth39_1067 YP_001665058.1 type II secretion system protein E VFG0182 Protein 5e-103 52
Teth39_1067 YP_001665058.1 type II secretion system protein E VFG2048 Protein 7e-103 51
Teth39_1067 YP_001665058.1 type II secretion system protein E VFG1876 Protein 2e-94 49
Teth39_1067 YP_001665058.1 type II secretion system protein E VFG0233 Protein 5e-86 46
Teth39_1067 YP_001665058.1 type II secretion system protein E VFG0112 Protein 1e-89 42
Teth39_1067 YP_001665058.1 type II secretion system protein E VFG1880 Protein 2e-86 41