Gene Information

Name : MAE_08530 (MAE_08530)
Accession : YP_001655867.1
Strain : Microcystis aeruginosa NIES-843
Genome accession: NC_010296
Putative virulence/resistance : Virulence
Product : ABC-transporter permease
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1108
EC number : -
Position : 748440 - 749345 bp
Length : 906 bp
Strand : +
Note : -

DNA sequence :
ATGGGCAACAATCTATTAACAGGATTAATCGAACCCTTACAGTATAGTTTCATGCAGAGATCCCTAATTGAAGCTATCAT
CGTCGGGATCATTTGTGCGGTGGTGGGAACCTACCTGATGGTACAACGTTTGGCCCTCTTGGGCGATGCCATCAGTCACT
CGGTCTTACCCGGATTAGCGATCGCTTTTATTGGTAATTTTAATCTGCTACTGGGTGCTTTACTAGCCTCAATGGTCAGT
ACTCTACTGATTAACTTGATCCGTAATCGTTCCCCAATCAAAGAAGATGCGGCCATGGGTATCGTTTTCTCGGCTTTTTT
TGCCCTTGGCATCACCCTGATCACTCTCATCCAAAAAAACAACAAAATTGACCTGAATCACTTTCTCTTCGGCAATATTC
TGGGTGTCACTGCTGCCGACATCCGCGATACCCTAATTATTGCCGTTATCGTTTTGTTAACCGTTTTGCTCCTGTATAAA
GAACTATTATTCTACACTTTCGACAAAATCGGGGCGCAAGCGGCGGGTTTACCGGTAAATTTATTAGATTTAGGCTTAAT
GCTCCTGATCGGTCTGACAATAGTTGCTAGTCTCCAAGCGGTGGGAGTAATCCTCGTTTTGTCCCTTTTGATTACCCCCG
CGGCCACTGCTTATCTTTTAGTTACCCGTCTCCATCAAGTCATGGGTGTGGGTGTGGGTGTGGGTATTATTTCTAGTATC
AGTGGGATGTATTTAAGTTATTACTGGAATTTACCCTCTGGACCTGCGATCGTGCTTGTCGCTTTTAGCCTATTTATGTT
GGCCTTTTTATTCAGTCCCCGTCAGGGAATTTTCACCCATCCCTCTAGTCTAGGTGGTCAACTTTCTATCTGGGGAGAGA
TGAAAAATTTGTTGAGACGACGTTAG

Protein sequence :
MGNNLLTGLIEPLQYSFMQRSLIEAIIVGIICAVVGTYLMVQRLALLGDAISHSVLPGLAIAFIGNFNLLLGALLASMVS
TLLINLIRNRSPIKEDAAMGIVFSAFFALGITLITLIQKNNKIDLNHFLFGNILGVTAADIRDTLIIAVIVLLTVLLLYK
ELLFYTFDKIGAQAAGLPVNLLDLGLMLLIGLTIVASLQAVGVILVLSLLITPAATAYLLVTRLHQVMGVGVGVGIISSI
SGMYLSYYWNLPSGPAIVLVAFSLFMLAFLFSPRQGIFTHPSSLGGQLSIWGEMKNLLRRR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitD NP_457258.1 Iron transport protein, inner membrane component Virulence SPI-1 Protein 5e-20 42
sitD NP_806467.1 iron transporter inner membrane protein Virulence SPI-1 Protein 5e-20 42
sitD YP_217784.1 iron transporter: fur regulated Virulence SPI-1 Protein 4e-20 42
sitD NP_461785.1 permease Virulence SPI-1 Protein 3e-20 42
sitD AAD41068.1 SitD Virulence centisome 63 pathogenicity island Protein 3e-20 42
EF0576 NP_814341.1 cation ABC transporter permease Not tested Not named Protein 1e-18 41
ef0094 AAM75297.1 EF0094 Not tested Not named Protein 7e-19 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
MAE_08530 YP_001655867.1 ABC-transporter permease BAC0442 Protein 9e-21 44
MAE_08530 YP_001655867.1 ABC-transporter permease BAC0352 Protein 2e-20 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
MAE_08530 YP_001655867.1 ABC-transporter permease VFG0528 Protein 1e-20 42