Gene Information

Name : MAE_59550 (MAE_59550)
Accession : YP_001660969.1
Strain : Microcystis aeruginosa NIES-843
Genome accession: NC_010296
Putative virulence/resistance : Virulence
Product : ATP-dependent Clp protease ATPase subunit
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG0542
EC number : -
Position : 5486669 - 5489134 bp
Length : 2466 bp
Strand : -
Note : -

DNA sequence :
ATGTTTGAAAGATTTACGGAAAAAGCCATTAAAGTAATCATGCTCGCCCAAGAAGAAGCCCGCCGCCTTGGCCATAACTT
CGTGGGAACAGAGCAGATTTTACTAGGACTAATTGGAGAGGGAACGGGAGTTGCCGCCAAAGTCCTCAAGTCCATGGGTG
TCAATCTCAGAGATGCGCGCGTGGAGGTGGAGAAAATCATCGGTCGCGGTTCCGGATTCGTAGCCGTGGAAATTCCCTTC
ACCCCCAGAGCCAAACGAGTTTTAGAACTCTCCCTCGAAGAAGCCCGTCAACTGGGCCATAACTATATTGGCACAGAACA
CCTCCTTTTAGGACTAATTCGCGAAGGGGAAGGTGTGGCCGCTAGGGTTCTGGAAAATCTCGGCGTGGATCTCTCGAAAG
TTCGCACCCAAGTGATCAGAATGTTAGGGGAAACCGCCGAAGTGGCCGCCGGTTCATCTTCCCAAGGTCGCACCAAAACC
CCCACTCTTGACGAATTCGGTTCCAATCTCACCCAAATGGCCAGCGAGGGTAAACTCGATCCCGTGGTCGGCCGACAAAA
GGAAATCGAGCGCGTTATCCAAATTCTCGGTCGTCGTACCAAAAATAACCCCGTCCTGATCGGGGAACCGGGGGTAGGTA
AAACAGCGATCGCAGAAGGATTGGCCCAACGCATCGCTAACAAGGATATTCCCGACATTCTCGAAGAAAAACGGGTTGTC
ACCCTCGATATCGGCTTGTTAGTGGCAGGAACCAAATATCGCGGCGAATTTGAGGAACGCCTCAAAAAAATCATGGACGA
AATTCGCCAAGCGGGTAACGTCGTCCTTGTTATCGATGAAGTTCATACTCTCATCGGTGCCGGGGCAGCCGAAGGGGCGA
TCGATGCGGCCAATATTCTCAAACCGGCTTTGGCCCGAGGAGAACTACAATGTATCGGGGCGACGACCTTGGATGAGTAC
CGCAAACATATCGAACGGGATGCGGCTCTAGAAAGACGTTTTCAACCGGTTATGGTCGGTGAACCCTCCGTAGAAGAAAC
GATCGAAATTCTCTACGGTCTCCGGGAACGCTACGAACAGCACCACAAACTAAAAATCTTAGATGAGGCCCTGGAAGCGG
CGGCGAAATTGTCCGATCGCTACATTAGCGATCGCTTTTTACCGGACAAGGCGATCGATTTAATCGATGAAGCTGGTTCG
AGAGTGCGCTTGATTAATTCCCAATTGCCCCCAGCAGCCAAGGAATTAGATAAAGAACTGCGGCAAATTCTCAAACAAAA
AGATGATGCGGTGCGCGGTCAAGACTTCGAGAAAGCTGGGGAATTGCGCGATCGGGAAATGGAAATCAAAACCCAGATCC
GGAATCTCGCTTCCACCAAAAAAGGCGAAGATGGCAACGATGAACCCTTTGTGGATGCCGAGGAAATCGCTCACATCGTC
GCTTCTTGGACTGGGGTTCCCGTCAACAAACTGACCGAAACCGAATCCGAGAAACTGCTGCACATGGAAGATACCCTGCA
TCAGCGTCTCATCGGTCAAGAGGACGCAGTTAAAGCGGTGTCTCGCGCCATTCGTCGCGCTCGCGTCGGTCTGAAAAATC
CCAACCGTCCCATTGCTTCCTTTATCTTCTCCGGTCCAACGGGGGTAGGTAAAACCGAGTTAACTAAAGCTCTGGCCGCT
TATTTCTTTGGTTCCGAAGATGCGATGATCCGTCTCGATATGTCGGAATACATGGAACGGCACACGGTTTCTAAGTTAAT
CGGTTCGCCTCCGGGTTATGTTGGTTACAACGAAGGGGGACAATTAACGGAAGCGGTGCGTCGTCGTCCTTATACGGTGG
TGCTATTCGACGAAATCGAAAAAGCTCACCCCGATGTCTTCAATATGCTTCTGCAAATCCTTGAAGATGGACGTTTGACC
GATGCCAAAGGTCGCACGGTGGACTTTAAAAATACCCTGTTGATCATGACCTCGAACATCGGTTCTAAAGTCATCGAGAA
GGGTGGCGGTGGTTTAGGTTTCGAGTTTGCCGATAATCAAGCCGAGGCCCAGTATAATCGCATTCGATCGCTGGTTAATG
AGGAATTAAAACAATATTTCCGTCCGGAATTCCTCAACCGTCTCGATGAGATTATTGTCTTCCGTCAACTCAATAAGGAA
GAAGTCAAGGAAATCGCCGAAATCCTGCTCAAGGATGTGTTTAAACGTCTGACAGAACAAAATATTACTTTGTCTGTCAC
CGATAAGTTTAAAGAACGCTTGATCGAGGAAGGTTATAATCCGGCCTACGGCGCTCGTCCCTTACGTCGTGCGATTATGC
GTCTGTTGGAAGATGTTCTGGCTGAGGAAATTCTCTCCGGACGGGTTTCTGATGGGGATACGGCTATGGTCGATATCGAT
GAGGAAGGTAAGGTGAAAGTTATTTCGGGGGAAAGACGCGAGTTAATCGCTCCCGTGATCGAATAA

Protein sequence :
MFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGVAAKVLKSMGVNLRDARVEVEKIIGRGSGFVAVEIPF
TPRAKRVLELSLEEARQLGHNYIGTEHLLLGLIREGEGVAARVLENLGVDLSKVRTQVIRMLGETAEVAAGSSSQGRTKT
PTLDEFGSNLTQMASEGKLDPVVGRQKEIERVIQILGRRTKNNPVLIGEPGVGKTAIAEGLAQRIANKDIPDILEEKRVV
TLDIGLLVAGTKYRGEFEERLKKIMDEIRQAGNVVLVIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLDEY
RKHIERDAALERRFQPVMVGEPSVEETIEILYGLRERYEQHHKLKILDEALEAAAKLSDRYISDRFLPDKAIDLIDEAGS
RVRLINSQLPPAAKELDKELRQILKQKDDAVRGQDFEKAGELRDREMEIKTQIRNLASTKKGEDGNDEPFVDAEEIAHIV
ASWTGVPVNKLTETESEKLLHMEDTLHQRLIGQEDAVKAVSRAIRRARVGLKNPNRPIASFIFSGPTGVGKTELTKALAA
YFFGSEDAMIRLDMSEYMERHTVSKLIGSPPGYVGYNEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMLLQILEDGRLT
DAKGRTVDFKNTLLIMTSNIGSKVIEKGGGGLGFEFADNQAEAQYNRIRSLVNEELKQYFRPEFLNRLDEIIVFRQLNKE
EVKEIAEILLKDVFKRLTEQNITLSVTDKFKERLIEEGYNPAYGARPLRRAIMRLLEDVLAEEILSGRVSDGDTAMVDID
EEGKVKVISGERRELIAPVIE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
clpC YP_005163377.1 ATP-dependent Clp protease ATP-binding subunit Not tested Not named Protein 0.0 59

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
MAE_59550 YP_001660969.1 ATP-dependent Clp protease ATPase subunit VFG0079 Protein 0.0 61
MAE_59550 YP_001660969.1 ATP-dependent Clp protease ATPase subunit VFG0080 Protein 2e-155 53