Gene Information

Name : MAE_52640 (MAE_52640)
Accession : YP_001660278.1
Strain : Microcystis aeruginosa NIES-843
Genome accession: NC_010296
Putative virulence/resistance : Virulence
Product : OmpR family two-component response regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 4827330 - 4828082 bp
Length : 753 bp
Strand : +
Note : -

DNA sequence :
ATGTTAACCCTTGACACCCCCCCCTTGTCGGCGAGTGCGGATTTCGTTCCCAATCATCGGATTTTAATCGTTGAAGATGA
AGAAGTGATTCGGGATATGATTATTTTGGCTTTGGAAGAAGAAGGTTACGAGGCTCTCGGTGTTAGTGATGGTCGCGTTG
CCCTAGAATTACTGCAAAGTCAAGAATCTAATCACGGTGAGTCTCGTTTTGATTTGGTCGTTTTGGATTTAATGTTACCC
CAAATCAACGGTCTTGATATCTGTCGTCTGTTGCGCTATCACGGCAATATTATCCCGATTTTAATTTTAAGTGCTAAGGC
CAGCGAAACCGATCGAGTTTTGGGTTTAGAAGTAGGTGCCGATGATTATCTGACTAAACCCTTTAGTATGCGAGAATTAG
TCGCTCGTTGTCGCGCTCTCATTCGTCGTCAAGGATTTACTTCCCTAGCTGCCGCTCCCGTGCGAAAATTCCGCGATGTT
CTTCTCTATCCCCAGGAATGTCGGGTGACGGTGCGAGATGAAGAAATTAACCTTTCTCCTAAAGAATTCCGTCTCCTAGA
CCTATTTATGAGTTATCCGCGCCGAGTTTGGTCAAGAGAGCAATTAATTGAACAAATTTGGGGGCCAGATTTTTTAGGAG
ACACCAAAACCGTCGATGTTCACATTCGCTGGTTACGGGAAAAACTAGAAATCGATCCCAGTCAACCGGAATACCTGATT
ACTGTACGCGGTTTCGGTTATCGTTTTGGCTAG

Protein sequence :
MLTLDTPPLSASADFVPNHRILIVEDEEVIRDMIILALEEEGYEALGVSDGRVALELLQSQESNHGESRFDLVVLDLMLP
QINGLDICRLLRYHGNIIPILILSAKASETDRVLGLEVGADDYLTKPFSMRELVARCRALIRRQGFTSLAAAPVRKFRDV
LLYPQECRVTVRDEEINLSPKEFRLLDLFMSYPRRVWSREQLIEQIWGPDFLGDTKTVDVHIRWLREKLEIDPSQPEYLI
TVRGFGYRFG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
c3565 NP_755440.1 response regulator Not tested PAI I CFT073 Protein 9e-31 47
unnamed CAD42044.1 hypothetical protein Not tested PAI II 536 Protein 9e-31 46

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
MAE_52640 YP_001660278.1 OmpR family two-component response regulator AE016830.1.gene1681. Protein 2e-39 45
MAE_52640 YP_001660278.1 OmpR family two-component response regulator NC_012469.1.7685629. Protein 1e-36 44
MAE_52640 YP_001660278.1 OmpR family two-component response regulator NC_007622.3794948.p0 Protein 4e-28 43
MAE_52640 YP_001660278.1 OmpR family two-component response regulator NC_003923.1003417.p0 Protein 4e-28 43
MAE_52640 YP_001660278.1 OmpR family two-component response regulator NC_013450.8614146.p0 Protein 4e-28 43
MAE_52640 YP_001660278.1 OmpR family two-component response regulator NC_002951.3238224.p0 Protein 4e-28 43
MAE_52640 YP_001660278.1 OmpR family two-component response regulator NC_007793.3914065.p0 Protein 4e-28 43
MAE_52640 YP_001660278.1 OmpR family two-component response regulator NC_002758.1121390.p0 Protein 4e-28 43
MAE_52640 YP_001660278.1 OmpR family two-component response regulator NC_010079.5776364.p0 Protein 4e-28 43
MAE_52640 YP_001660278.1 OmpR family two-component response regulator NC_002952.2859858.p0 Protein 4e-28 43
MAE_52640 YP_001660278.1 OmpR family two-component response regulator CP000034.1.gene3671. Protein 4e-33 43
MAE_52640 YP_001660278.1 OmpR family two-component response regulator FJ349556.1.orf0.gene Protein 2e-31 42
MAE_52640 YP_001660278.1 OmpR family two-component response regulator NC_012469.1.7686381. Protein 6e-38 42
MAE_52640 YP_001660278.1 OmpR family two-component response regulator HE999704.1.gene2815. Protein 2e-39 42
MAE_52640 YP_001660278.1 OmpR family two-component response regulator AE000516.2.gene3505. Protein 3e-31 42
MAE_52640 YP_001660278.1 OmpR family two-component response regulator NC_002952.2859905.p0 Protein 8e-36 41
MAE_52640 YP_001660278.1 OmpR family two-component response regulator NC_003923.1003749.p0 Protein 7e-36 41
MAE_52640 YP_001660278.1 OmpR family two-component response regulator NC_002745.1124361.p0 Protein 6e-36 41
MAE_52640 YP_001660278.1 OmpR family two-component response regulator NC_009782.5559369.p0 Protein 6e-36 41
MAE_52640 YP_001660278.1 OmpR family two-component response regulator NC_002951.3237708.p0 Protein 6e-36 41
MAE_52640 YP_001660278.1 OmpR family two-component response regulator NC_007622.3794472.p0 Protein 8e-36 41
MAE_52640 YP_001660278.1 OmpR family two-component response regulator NC_002758.1121668.p0 Protein 6e-36 41
MAE_52640 YP_001660278.1 OmpR family two-component response regulator NC_009641.5332272.p0 Protein 6e-36 41
MAE_52640 YP_001660278.1 OmpR family two-component response regulator NC_013450.8614421.p0 Protein 6e-36 41
MAE_52640 YP_001660278.1 OmpR family two-component response regulator NC_007793.3914279.p0 Protein 6e-36 41
MAE_52640 YP_001660278.1 OmpR family two-component response regulator HE999704.1.gene1528. Protein 5e-25 41
MAE_52640 YP_001660278.1 OmpR family two-component response regulator BAC0347 Protein 2e-25 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
MAE_52640 YP_001660278.1 OmpR family two-component response regulator VFG1702 Protein 4e-31 47
MAE_52640 YP_001660278.1 OmpR family two-component response regulator VFG1563 Protein 5e-31 46
MAE_52640 YP_001660278.1 OmpR family two-component response regulator VFG1389 Protein 2e-27 42