Gene Information

Name : MAE_25950 (MAE_25950)
Accession : YP_001657609.1
Strain : Microcystis aeruginosa NIES-843
Genome accession: NC_010296
Putative virulence/resistance : Virulence
Product : ATP-dependent Clp protease ATPase subunit
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG0542
EC number : -
Position : 2345902 - 2348289 bp
Length : 2388 bp
Strand : +
Note : -

DNA sequence :
ATGTTTGAATACTTTAACCAGAAAGCTATCAAAGCGGTGATGTTCGCCCAAGAGGAAGCCCGTCGTACCGGTCACAGTGT
CGTCGGTACGGAGCATTTACTGTTAGGATTGATAGGAGAAGCCACCGCCACCGCAGCCTTAATTCTCAAGGATTTAAAAG
TTACCCTGCACGAAAGTCGCCGCCTGATTGAAGGAATGACCGGCCGCGGCACCGGTTACAGTCCCGTTAATATCCCTTTT
ACCCCGAAAGCGAAAAAGATGTTCGAGCAAGCATTTCAGGAAGCTCGACAATTAGGGGAAAATGCGATCGCAACTGAACA
TCTATTACTCGCTATCACCAGCGATCCCGAATCCCTAGCCGCTAAAATTTTAATTATGCAGGGTGTTGATTTGATCAAAC
TTCGCGGCCTTTTAATTAAAAATGCCGGGGAAAAAGTCGCTAGTGGTCGCTTCACGGCCAAGAGTGACTATGAAGACCAG
AAAAATGCTCCCCAAGGCGGGATTTTAGCCCAATATGGTCGCAATTTAAACCAAGAGGTCAAAAATGGCAAAATTGACCC
TGTAATCGGTAGAGAGCCAGAAATCGAGCGAGTTGTCCAAATTTTAGGCCGTCGTACCAAAAGTAACCCGATTTTACTGG
GTGAGCCGGGGGTGGGCAAAACAGCGATCGCTGAAGGGTTAGCACAACGCATCCATAATGGCGATATTCCCGAACTTTTG
CAGGATAAACAGGTAATTGCCCTCGATATGGGGTCTTTACTGGCGGGAACCCGTTTTCGCGGCGATTTTGAGGAACGTTT
AAAGGGTATCGTGGAGGAAGTTCGCAAATCGGGCAATATTATCCTGTTTATCGATGAAATTCACACTCTTGTGGGTGCTG
GTAGCATGGGAGGAGCCATGGATGCTTCTAACTTGCTTAAACCTGCTTTAGCTCGCGGGGAGTTACAGTGTTTAGGGGCA
ACAACTCTCGATGAGTATAAACGGCATATTGAGCGAGATGCGGCTCTAGAAAGACGTTTTCAGCCAGTTATGGTGGGAGA
ACCAACTAAAGAGCAGGCGATCGAGATTTTACGCGGTTTAAAAGCCACCTACGAGGATTTCCATCAGGTAAAATACGATC
AAAAAGCGATCGAAGCTGCCGTTAATCTATCCTCGCGCTATATCAATGATCGCTTTTTACCGGACAAAGCGATCGATCTT
CTCGATGAAGCGGGATCCCGCACCCATCTACGCTATTCCCTGCAAAGTACAAGTCCTGCGGAGGTTAGGGAAGAATCACC
CCTAATTAACCCCGAATCTTTAATTCCAGTGGTGGATGCGGAGGAAATCGCCCAAATTGTCGCCGCTTGGACAGGTATTC
CCGTTACCCAATTAACTGAAACTGAGTCGGAATCGCTCTTAAATCTGGAATGTCAACTGCACGAGCGGATTATTGGCCAA
CAGGAGGCAGTGAATGCCGTTTCTCGTGCTATTCGTCGAGCGCGAGTAAATTTAAAGAATCCTAACCGTCCGATTGCCTC
GTTTATTTTTGCCGGTCCCACGGGAGTCGGTAAAACTGAATTAACGAAAGCCTTAGCTAAGTTGCTCTTTGGCTCGGAAT
CCAGTATGATTCGCCTAGATATGTCGGAATTTATGGAATCCCACACGGTTTCTAAATTAATTGGTGCGCCTCCCGGATAC
ATCGGTTACAATGAAGGCGGTCAGTTAACGGAAGCAGTGCGTCGTCAACCCTATAGAGTGGTCTTGTTTGACGAAATCGA
GAAAGCACATCCCGATGTTTTTAATCTTCTCCTGCAACTGTTAGAAGATGGTCATTTGACCGATTCCCAAGGTCGTCGGG
TGGACTTTAAGAATACCCTAATTATCATGACCTCGAATATTGGCTCAAAAGTCATCGAAAAAGGCGGTAATAGCTTAGGA
TTCGAGATTGCTGACGATTTTGCTCAATCGCGCTACCAACAGATTTCTAATCGGGTGACAGAGGAGTTAAAACAATATTT
CCGTCCCGAATTTCTCAACCGTCTCGATGAAATCATTGTTTTCCGACAGTTAACTCGCGAAGAAGTTACCCAGATTGCCG
ATATTCTGATCGCGGATCTAGCCAAACAATTGACAGAAAAAGGCATTTCTGTGGAAGTTACCGCCGCTTTTAAGGATTTG
GTCATCAATGAGGGTTATGATCCTAGCTACGGTGCGCGGCCTTTACGTCGTGCTTTAACTCGACGCTTAGAGGATAGTTT
AGCGGTCGCGATGTTATCGGGAAAAGTCAATTCTGGAGACCATGCGATATTAGATGTAACTGCTGAAGCTGTGGTGACAG
TCTCTAGTCATCAGCGCTCTGAGCAAAGCGATATTCTCTCGCAATTACAGTTACAACCAGTGGGTTAA

Protein sequence :
MFEYFNQKAIKAVMFAQEEARRTGHSVVGTEHLLLGLIGEATATAALILKDLKVTLHESRRLIEGMTGRGTGYSPVNIPF
TPKAKKMFEQAFQEARQLGENAIATEHLLLAITSDPESLAAKILIMQGVDLIKLRGLLIKNAGEKVASGRFTAKSDYEDQ
KNAPQGGILAQYGRNLNQEVKNGKIDPVIGREPEIERVVQILGRRTKSNPILLGEPGVGKTAIAEGLAQRIHNGDIPELL
QDKQVIALDMGSLLAGTRFRGDFEERLKGIVEEVRKSGNIILFIDEIHTLVGAGSMGGAMDASNLLKPALARGELQCLGA
TTLDEYKRHIERDAALERRFQPVMVGEPTKEQAIEILRGLKATYEDFHQVKYDQKAIEAAVNLSSRYINDRFLPDKAIDL
LDEAGSRTHLRYSLQSTSPAEVREESPLINPESLIPVVDAEEIAQIVAAWTGIPVTQLTETESESLLNLECQLHERIIGQ
QEAVNAVSRAIRRARVNLKNPNRPIASFIFAGPTGVGKTELTKALAKLLFGSESSMIRLDMSEFMESHTVSKLIGAPPGY
IGYNEGGQLTEAVRRQPYRVVLFDEIEKAHPDVFNLLLQLLEDGHLTDSQGRRVDFKNTLIIMTSNIGSKVIEKGGNSLG
FEIADDFAQSRYQQISNRVTEELKQYFRPEFLNRLDEIIVFRQLTREEVTQIADILIADLAKQLTEKGISVEVTAAFKDL
VINEGYDPSYGARPLRRALTRRLEDSLAVAMLSGKVNSGDHAILDVTAEAVVTVSSHQRSEQSDILSQLQLQPVG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
clpC YP_005163377.1 ATP-dependent Clp protease ATP-binding subunit Not tested Not named Protein 4e-173 49

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
MAE_25950 YP_001657609.1 ATP-dependent Clp protease ATPase subunit VFG0080 Protein 3e-140 52
MAE_25950 YP_001657609.1 ATP-dependent Clp protease ATPase subunit VFG0079 Protein 4e-174 50