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Name : serS (APJL_0880) Accession : YP_001651882.1 Strain : Actinobacillus pleuropneumoniae JL03 Genome accession: NC_010278 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0172 EC number : - Position : 972486 - 973793 bp Length : 1308 bp Strand : + Note : catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA DNA sequence : ATGATCGACCAAAATCTTCTTCGTACTAATTTAGACGATGTTGCAAATGCACTTAAAGTTAAACGTGGTTTTACCCTTGA TGTAGAGAGTGTAAAAGCATTGGAAGAAAAACGTAAAGCACTTCAAGTTAAAACAGAAACCTTACAAGCGGAACGTAACG CCCGTTCGAAAAATATCGGTGCGGCAAAAGCTCGCGGCGAAGATATTTCTGCGTTATTAGCGGAAGTGGATAATATGGGT AACGAATTAAACGAAGCGAAAGTCGCTTTAGACCAAGTTCAAGCGGAAATTCGTGAATTACTCTTATCTGTGCCGAACTT ACCGGCTGACGAAGTACCGTTAGGTAAAGACGACACGGAAAACTTAGAAGTGTCACGTTGGGGCGAGCCTCGTCAATTTG ACTTTGAAGTCAAAGATCACGTGGCGTTAGGCGAAGCGTTAAACGGTTTAGATTTTGCTGCCGGCGTAAAATTAACCGCT AGCCGTTTTGTCGTGATGAAAGGCAAACTTGCTCGTTTACACCGTGCCTTATCGCAATTTATGTTAGATCTTCACACAGA ACAACACGGCTATGTGGAAACAAACGTACCGTTCTTAGTCAACCACGACACGCTGTTCGGTACCGGTCAATTACCAAAAT TCGGTGAAGATTTATTCCATACTCAACCATTAACCGGTCAAGATCCTAACGAAACGCAACGCCCGTTCAGCTTAATCCCA ACGGCGGAAGTACCGGTAACGAACTTAGTGCGTGACGAAATTATTGATGAAGACAGCTTACCGTTACGCTATACGGCACA TACGCCGTGTTTCCGTTCTGAAGCAGGTTCTTACGGTCGTGACACACGCGGTTTAATTCGTATGCACCAATTCGAAAAAG TGGAAATGGTACAGATCGTTGCACCGGAAAAATCAATGGAAGCGTTAGAAGAATTAACCGGTCACGCTGAAAAAGTATTA CAACTTTTAGGCTTACCATACCGTAAAGTTTTACTTTGTACCGGCGATATGGGCTTCGGTTCAGCAAAAACTTATGACTT AGAAGTTTGGTTACCGGCACAAAATACTTACCGTGAGATTTCTTCTTGCTCAAATATGTGGGATTTCCAAGCTCGCCGTA TGTCTGCACGTTGCAAAGCGAAAGGCGACAAGAAAACTCGCTTAGTCCACACCTTAAACGGCTCAGGTTTAGCGGTGGGT CGTACGTTAGTTGCGGTACTTGAAAACTATCAAAACGCTGACGGTTCAATCACTGTTCCGGAAGTATTACGTCCATATAT GGGCGGTGTGGAAGTGATTACCGCTTAA Protein sequence : MIDQNLLRTNLDDVANALKVKRGFTLDVESVKALEEKRKALQVKTETLQAERNARSKNIGAAKARGEDISALLAEVDNMG NELNEAKVALDQVQAEIRELLLSVPNLPADEVPLGKDDTENLEVSRWGEPRQFDFEVKDHVALGEALNGLDFAAGVKLTA SRFVVMKGKLARLHRALSQFMLDLHTEQHGYVETNVPFLVNHDTLFGTGQLPKFGEDLFHTQPLTGQDPNETQRPFSLIP TAEVPVTNLVRDEIIDEDSLPLRYTAHTPCFRSEAGSYGRDTRGLIRMHQFEKVEMVQIVAPEKSMEALEELTGHAEKVL QLLGLPYRKVLLCTGDMGFGSAKTYDLEVWLPAQNTYREISSCSNMWDFQARRMSARCKAKGDKKTRLVHTLNGSGLAVG RTLVAVLENYQNADGSITVPEVLRPYMGGVEVITA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 8e-108 | 54 |
