Gene Information

Name : dnaB2 (APJL_0713)
Accession : YP_001651722.1
Strain : Actinobacillus pleuropneumoniae JL03
Genome accession: NC_010278
Putative virulence/resistance : Unknown
Product : replicative DNA helicase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0305
EC number : -
Position : 787104 - 788585 bp
Length : 1482 bp
Strand : -
Note : -

DNA sequence :
ATGCCTGAATACACGCCAACTAATAAAGAGAATTCAAGGGACAAGCAAGTGGAACAAATTGCGATTGCTCCTCACTCTAT
CGAAGCGGAACAAGCCGTATTAGGCGGTATTATGCTCAATAACGAACATTGGGATAACGTTTCCGAACGTATTCAAGCCG
GTGATTTTTATAACTATGCACATCGTACTATTTTCGAGCAAATGGTGGAGTTGGTACGTCATAATCAACCGATTGATATT
ATTACGTTAGATCAAGCGTTGAAAGATAAAGGCGTACTACAAGATGTAGGCGGTTTTGCCTATTTGGCAGAGTTATCTAA
GAACACGCCGAGTGCGGCGAATATTCTTGCTTATGCCGATATTGTCCGTGACCGTTCGGATCTGCGAGGGGTGATTTCGG
CCGGTAATCAAATTGCGGAAATGGCCTATCATACCAAAGGCAGAAGTTCAAAAGACGTGTTGGATGAAGCCGAGCGAATT
GTGTTTGAAATTGCAGAGAAACGCAATTCGGCGAATGAAGGCCCGCAAAAGATTGATGATATTTTAATTAATACGCTTGC
TCGTATCGAAATGCTTTCTAAAAATCGTCATAACGGCGGAGTAACGGGAGTTTCAACCGGTTTCCTCGATTTAAATAAAA
AAACCGCAGGTTTACAGCCGTCGGATTTAATTATCGTTGCGGCGCGTCCGTCTATGGGTAAAACTACGTTTGCGATGAAC
TTATGTGAAAATGCTTCGTTACTGGATGTAGAAGATCCGAATGATTTGGACGAATACGGTAATCCTCGCAAAAAGCCGGC
GAAACCGGTATTAATTTTCAGTCTTGAGATGCCGGCGGACCAAATTATGATGCGTATGTTGGCTTCGCTTTCTCGCGTGG
ATCAAACCAAGATCCGAACCGGACAAATTCATGACGATGAAGATTGGGCGAAAATATCCAGTACGATGGCAATCTTGCAA
GAGCGCAAAAATATCTATATTGACGACAGTTCCGGCTTAACGCCGACCGAATTACGTTCTCGTGCAAGACGTGTATATCG
TGAGAACGGCGGGCTAAGTATGATCATGGTGGATTATTTGCAGTTAATGCGTGCGCCGGCGTTTTCCGATAACCGAACCC
TAGAGATTGCCGAAATTTCTCGATCTCTGAAAGCGTTGGCAAAAGAATTACAAGTGCCGGTTGTTGCACTTTCTCAGTTA
AACCGAAGTTTGGAACAACGCGCCGATAAACGACCGGTAAACTCGGATTTACGTGAATCCGGCTCTATCGAGCAAGATGC
GGACTTAATTATGTTTATTTATCGTGATGAAGTGTATAACGATAATTCCGATTTAAAAGGTATTGCCGAAATTATTATCG
GTAAGCAGCGTAACGGTCCGATTGGACGAGTGCGTTTAACTTTCCAAGGACAATATTCAAGATTTGATAACTATACAGGC
GGATCCTATGACGATGAGTACTCATCTCTGTGCGATTTATAA

Protein sequence :
MPEYTPTNKENSRDKQVEQIAIAPHSIEAEQAVLGGIMLNNEHWDNVSERIQAGDFYNYAHRTIFEQMVELVRHNQPIDI
ITLDQALKDKGVLQDVGGFAYLAELSKNTPSAANILAYADIVRDRSDLRGVISAGNQIAEMAYHTKGRSSKDVLDEAERI
VFEIAEKRNSANEGPQKIDDILINTLARIEMLSKNRHNGGVTGVSTGFLDLNKKTAGLQPSDLIIVAARPSMGKTTFAMN
LCENASLLDVEDPNDLDEYGNPRKKPAKPVLIFSLEMPADQIMMRMLASLSRVDQTKIRTGQIHDDEDWAKISSTMAILQ
ERKNIYIDDSSGLTPTELRSRARRVYRENGGLSMIMVDYLQLMRAPAFSDNRTLEIAEISRSLKALAKELQVPVVALSQL
NRSLEQRADKRPVNSDLRESGSIEQDADLIMFIYRDEVYNDNSDLKGIAEIIIGKQRNGPIGRVRLTFQGQYSRFDNYTG
GSYDDEYSSLCDL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
PMI2640 YP_002152342.1 DNA helicase Not tested Not named Protein 4e-96 50
dnaB2 YP_001402701.1 replicative DNA helicase Not tested YAPI Protein 5e-97 49
api2 CAF28476.1 putative DNA binding protein with DNA-dependent ATPase activity Not tested YAPI Protein 3e-97 49
dnaB2 YP_001007676.1 putative DNA helicase Not tested YAPI Protein 2e-96 49
unnamed ABR13456.1 replicative DNA helicase Not tested PAGI-5 Protein 2e-94 47
dnaB1 YP_005176258.1 replicative DNA helicase Not tested ICEPmu1 Protein 5e-86 47
STY4522 NP_458617.1 DNA helicase Not tested SPI-7 Protein 3e-88 46
t4227 NP_807829.1 DNA helicase Not tested SPI-7 Protein 3e-88 46
dnaB CAI36044.1 replicative DNA helicase DnaB Not tested PPHGI-1 Protein 2e-81 44