Gene Information

Name : cpxA (APJL_1618)
Accession : YP_001652614.1
Strain : Actinobacillus pleuropneumoniae JL03
Genome accession: NC_010278
Putative virulence/resistance : Virulence
Product : capsule polysaccharide export transport system ATP-binding protein
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG1134
EC number : -
Position : 1775449 - 1776099 bp
Length : 651 bp
Strand : +
Note : -

DNA sequence : 
ATGATTAGCGTAAAAAATGTGAGTAAAGATTACTATACTCGAAGCGGTAAAAAAACCGTATTGCAAGATATTAATTTTGA
GCTGAAAAAAGGCGAGAAAATCGGTATTTTAGGGCGTAACGGTGCAGGGAAATCAACGCTAATCCGTTTGTTAAGTGGTG
TTGAGCCGCCAACATCAGGTACTATCGAACGTAATATGTCGATATCTTGGCCGCTCGCTTTCAGCGGGGCGTTCCAAGGC
AGTTTAACCGGTATGGATAATTTACGCTTTATTTGCCGTATATATAATGCGGATATTGAATACGTTAAAGCCTTTACCGA
AGAATTTTCCGAATTGGGTGATTATTTATATGAGCCGGTTAAGAAATATTCCTCCGGCATGAAAGCCCGACTTGCCTTTG
CTTTGTCGCTTTCGGTAGAGTTTGATTGCTACTTAATTGATGAGGTAATTGCGGTAGGTGACTCTCGCTTTGCGGCAAAA
TGTAAACATGAATTATTTGAAAAGCGCAAAGATCGTTCGATTATTTTGGTTTCGCATAGTCCGTCAGCAATGAAGTCTTA
TTGCGATAATGCAATGGTATTAGATAAAGGGATTATGTATAAATTTGAGAATATGGACGAGGCTTATAAGTTCTATAATT
CAACGCTTTAA

Protein sequence : 
MISVKNVSKDYYTRSGKKTVLQDINFELKKGEKIGILGRNGAGKSTLIRLLSGVEPPTSGTIERNMSISWPLAFSGAFQG
SLTGMDNLRFICRIYNADIEYVKAFTEEFSELGDYLYEPVKKYSSGMKARLAFALSLSVEFDCYLIDEVIAVGDSRFAAK
CKHELFEKRKDRSIILVSHSPSAMKSYCDNAMVLDKGIMYKFENMDEAYKFYNSTL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ctrD NP_273138.1 capsule polysaccharide export ATP-binding protein CtrD Not tested IHT-A Protein 1e-85 85
kpsT YP_854396.1 polysialic acid transport ATP-binding protein KpsT Not tested PAI I APEC-O1 Protein 1e-43 48
kpsT CAE85223.1 KpsT protein Virulence PAI V 536 Protein 4e-44 46

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
cpxA YP_001652614.1 capsule polysaccharide export transport system ATP-binding protein VFG0696 Protein 2e-85 86
cpxA YP_001652614.1 capsule polysaccharide export transport system ATP-binding protein VFG0258 Protein 4e-86 85
cpxA YP_001652614.1 capsule polysaccharide export transport system ATP-binding protein VFG2563 Protein 3e-64 60
cpxA YP_001652614.1 capsule polysaccharide export transport system ATP-binding protein VFG1449 Protein 5e-44 48