Gene Information

Name : cpxB (APJL_1617)
Accession : YP_001652613.1
Strain : Actinobacillus pleuropneumoniae JL03
Genome accession: NC_010278
Putative virulence/resistance : Virulence
Product : capsule polysaccharide export transport system permease
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG1682
EC number : -
Position : 1774727 - 1775452 bp
Length : 726 bp
Strand : +
Note : -

DNA sequence : 
ATGCGGGAAATTATTACGCGTTACGGACGAAAAAATTTGGGTTTTTTATGGCTGTTTGTTGAGCCGCTATTACTCACTTT
ATTTATCGTTTTGATGTGGAAATTTATCCGAGCGGATCGCGTTTCCGATTTAAATATTATTGCTTTTGTGATTACCGGTT
ATCCAATGGCAATGATGTGGCGTAATGCATCAAACCGCACTATCGGTGCAATTTCCGGTAACTTGAGTCTTCTTTATCAT
CGTAATGTTCGCGTATTAGATACCTTACTGGCTCGTGTCATACTTGAGGTAGCGGGTGCAACGATTGCCCAAATCATTAT
TATGGCATTAGTCATTTTATTAGGCTGGATAGAAATGCCGAAAGATACGTTTTATATGGTTATGGCGTGGGTATTAATGG
CATTTTTTGCATTAGGATTAGGCTTGATTATTTGTTCTATTGCACAAAAATTTGAAGCATTTGGCAAAATCTGGGGAACA
TTAAGCTTTGTTCTTTTACCTCTTTCAGGCGCATTTTTCTTTGTGCATGCGCTACCAAGCCAAGCTCAACAATATGCAAC
CTTAATACCGATGATTCACGGCACGGAAATGTTTCGTCACGGTTATTTTGGCGACAGTGTTATCACATATGAAAGTATAA
GCTATCTCGTAATATGTGATGTAGCCATGTTACTTTTTGGGCTCATTATGGTAAAAAACTTCAGTAAAGGAATCGAACCG
CAATGA

Protein sequence : 
MREIITRYGRKNLGFLWLFVEPLLLTLFIVLMWKFIRADRVSDLNIIAFVITGYPMAMMWRNASNRTIGAISGNLSLLYH
RNVRVLDTLLARVILEVAGATIAQIIIMALVILLGWIEMPKDTFYMVMAWVLMAFFALGLGLIICSIAQKFEAFGKIWGT
LSFVLLPLSGAFFFVHALPSQAQQYATLIPMIHGTEMFRHGYFGDSVITYESISYLVICDVAMLLFGLIMVKNFSKGIEP
Q

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ctrC NP_273137.1 capsule polysaccharide export inner-membrane protein Not tested IHT-A Protein 3e-90 75

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
cpxB YP_001652613.1 capsule polysaccharide export transport system permease VFG0685 Protein 4e-87 76
cpxB YP_001652613.1 capsule polysaccharide export transport system permease VFG0697 Protein 4e-87 76
cpxB YP_001652613.1 capsule polysaccharide export transport system permease VFG0257 Protein 1e-90 75
cpxB YP_001652613.1 capsule polysaccharide export transport system permease VFG2564 Protein 3e-45 42