Gene Information

Name : cpxC (APJL_1616)
Accession : YP_001652612.1
Strain : Actinobacillus pleuropneumoniae JL03
Genome accession: NC_010278
Putative virulence/resistance : Virulence
Product : capsule polysaccharide export transport system permease
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG3524
EC number : -
Position : 1773498 - 1774655 bp
Length : 1158 bp
Strand : +
Note : -

DNA sequence : 
ATGGAAACACCTATTGCTACCAGTCCAGCAGAAAAATTACAGAAACCGGTTAAACAGAAAAAAAGCCGCTTTAAAAAACT
CAATCCATTATTTTGGATAACTGTCGCAATCCCTACCGTGCTATCAGCGTTTTATTTCGGTTCGGTCGCTTCTGATATTT
ATATTTCGGAATCAAGTTTTGTCGTTAGATCGCCTAAAAATCAGACCGCTCTGACAGGCGTAGGCGCCTTATTGCAAGGT
TCAGGTTTTTCTCGTTCGCAAGACGATACTTATACCGTACAGGAATATATGCGTTCTCGTACCGCTCTTGAGCAACTAAT
GCAAGGATTACCTGTTCGCGAATATTATGAAAATCAGGGCGATATTATCGCTCGCTTTAATGGATTCGGATTAAATAACA
GTAAAGAAGCGTTTTATAAATATTTCCGAGATCGCTTAAGTGTGGACTTTGACTCTGTTTCCGGTATCGCCAGCTTACGT
ATTCGAGCATTTAACGCGGAAGAGGGGCAACAAATTAATCAAAAATTACTTGCCGAAGGTGAAACGCTTATTAACCGTTT
AAACGAACGTGCAAGAAAAGATACCATTTCATTTGCGGAACAAGCGGTTACAGAAGCGGAAAATAATGTAAACGAAACGG
CAAATGCTTTAAGTAAATACCGTATCAAAAATAAAATCTTTGATTTACCGGCACAATCCGGCGTACAACTTTCATTAATT
TCCAGCCTAAAAAGCGAATTGATTCGTGTAGAAACACAATTGGCTCAATTGCAATCTATTACACCGGACAACCCACAAGT
TGATGCATTGCTTATGCGCCAAAAAAGTTTACGTAAGGAAATCGATGAGCAATCAAAACAGCTTTCCAGTAACAGTAATA
GCTCTATTGCTATTCAAACTGCCGATTACCAACGCTTAGTACTTGCAAACGAGCTGGCACAGCAACAATTGACCGCAGCA
TTAACCTCATTACAAAATACGAAAAATGAAGCGGATCGCCAGCAACTTTATTTAGAAGTAATCAGTCAGCCAAGCAAACC
GGACTGGGCGGAAGAGCCTTATCGCTTATATAATATTTTAGCGACATTCTTTATCGGTCTGATGCTTTATGGTGTATTAA
GTTTATTAATTGCAAGCGTAAGAGAGCACAAAAACTAA

Protein sequence : 
METPIATSPAEKLQKPVKQKKSRFKKLNPLFWITVAIPTVLSAFYFGSVASDIYISESSFVVRSPKNQTALTGVGALLQG
SGFSRSQDDTYTVQEYMRSRTALEQLMQGLPVREYYENQGDIIARFNGFGLNNSKEAFYKYFRDRLSVDFDSVSGIASLR
IRAFNAEEGQQINQKLLAEGETLINRLNERARKDTISFAEQAVTEAENNVNETANALSKYRIKNKIFDLPAQSGVQLSLI
SSLKSELIRVETQLAQLQSITPDNPQVDALLMRQKSLRKEIDEQSKQLSSNSNSSIAIQTADYQRLVLANELAQQQLTAA
LTSLQNTKNEADRQQLYLEVISQPSKPDWAEEPYRLYNILATFFIGLMLYGVLSLLIASVREHKN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ctrB NP_273136.1 capsule polysaccharide export inner-membrane protein Not tested IHT-A Protein 3e-88 57

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
cpxC YP_001652612.1 capsule polysaccharide export transport system permease VFG0698 Protein 3e-107 79
cpxC YP_001652612.1 capsule polysaccharide export transport system permease VFG0686 Protein 3e-107 79
cpxC YP_001652612.1 capsule polysaccharide export transport system permease VFG0256 Protein 1e-88 57