Gene Information

Name : apxIIIC (APJL_1347)
Accession : YP_001652347.1
Strain : Actinobacillus pleuropneumoniae JL03
Genome accession: NC_010278
Putative virulence/resistance : Virulence
Product : hemolysin-activating lysine-acyltransferase HlyC
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG2994
EC number : -
Position : 1481231 - 1481647 bp
Length : 417 bp
Strand : -
Note : -

DNA sequence : 
TTGTTTACTAAGAATATTTTGCCAGCCATTCAACATGATCAATATATTTTACTTATGCGAGATGAGTTCCCTGTAGCGTT
TTGTAGTTGGGCAAATTTAACGTTAACTAATGAAGTGAAGTATGTACGTGATGTGACGTCATTGACTTTTGAAGATTGGA
ATTCAGGAGAACGAAAATGGTTGATCGACTGGATTGCGCCATTTGGGGATAACAATACGCTTTATAGATATATGCGTAAA
AAATTTCCTAATGAAGTATTCCGGGCCATTCGAGTATATCCTGGTTCTACAGAAGCGAAAATCATTCATGTTCAAGGAGG
ACAAATTAATAAATTTACAGCTAAAAAATTAATACAACAATATCAGGAAGAACTTATTCAAGTTCTTAACAATCACAAAA
AAATTGTAAGAGGATAA

Protein sequence : 
MFTKNILPAIQHDQYILLMRDEFPVAFCSWANLTLTNEVKYVRDVTSLTFEDWNSGERKWLIDWIAPFGDNNTLYRYMRK
KFPNEVFRAIRVYPGSTEAKIIHVQGGQINKFTAKKLIQQYQEELIQVLNNHKKIVRG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hlyC CAD42040.1 HlyC protein Virulence PAI II 536 Protein 2e-38 61
hlyC CAD33758.1 hemolysin C Virulence PAI I 536 Protein 3e-38 61

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
apxIIIC YP_001652347.1 hemolysin-activating lysine-acyltransferase HlyC VFG1559 Protein 8e-39 61
apxIIIC YP_001652347.1 hemolysin-activating lysine-acyltransferase HlyC VFG1499 Protein 1e-38 61
apxIIIC YP_001652347.1 hemolysin-activating lysine-acyltransferase HlyC VFG0842 Protein 3e-34 57