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Name : apxIIID (APJL_1344) Accession : YP_001652344.1 Strain : Actinobacillus pleuropneumoniae JL03 Genome accession: NC_010278 Putative virulence/resistance : Virulence Product : RTX-III toxin determinant D Function : - COG functional category : V : Defense mechanisms COG ID : COG1566 EC number : - Position : 1474432 - 1475865 bp Length : 1434 bp Strand : - Note : - DNA sequence : ATGAAGTTATGGATTCTAGGACTTGGGGAATTTTTTCAACGTTATCGTAATATTTGGCGTGAAATATGGAAAATCCGCAA ACAATTAGATACCCCAGCAAGACAAAAAGATGAAAACGAATTTTTGCCTGCGCATTTAGAGTTAATTGAGACACCTATTT CAAAAAAGCCACGGCTGATCGCTTATTTGATAATGCTATTTCTATTTTTAGCTATTGTAATTTCCATTATTAGTAAAGTA GAAATTGTTGCTAGTGCTACAGGTAAGTTGGTATTTAGTGGACATAGTAAAGAAATAAAGCCTATTGAGAATGCTTTAGT AAAAGACATTTTTGTTAAAGATGGACAATTTGTTGAAAAAGGACAATTATTATTAAATCTCACCGCACTTGGTGCCGATG CAGACAAACAAAAAACTAAAGTATCGTTAGGATTGGAAAGATTAGATGGTTACCGATATAAGTCATTGTTATATAGCATT GAACACAATAGATTACCTTTATTGGATTTTAACCAAGCTGATTTTGATTCTGTTCAGGAAGAAGATAAGACTAACGCACG TCATTTAATTACCGAACAATTTGAGACTTGGCAAAAACAAAAATATCAGAAGGAATTAGCGTATCAACGTAAACAAGCTG AAAAACAAACAGTATTAGCAAATATCCGTAAATATGAAAGCGCTAGTCGTATTGAAAAGGAGAAATTAAGTGATTTAAAA AAATTATATGATGTAAAGTCTATTTCTAAGCATGAGTTGTTAGCACAAGAAAATAGATATGTTGAAGCTAGTAATGAATT GTCTGTTTATCAATCTCATCTCAAAGAAGTAGAAAGTGACTTGCTTAAAGCACAAGAAGATTTAAAGCTTGTTACTCAAT TATTTAAGAGTGATATTTTGGAAAAACTACAGCAAAATATACAACGCGAAAAGCAGCTCACTTTAGAACTTGAGAAAAAT GAACAACGTCAATTAGCCTCTATCATTAGGGCGCCAGTATCAGGCACAGTCCAACAATTAAAAACTCATACTAAAGGTGG CGTAGTAACTACTGCAGAAACCTTAATGGTCATTGCTCCTGAGGATGACGTGTTGGAAGTAAGTGCTTTAATTCAAAACA AAGATATTGGTTTTGTTGAAATTGGACAGGAAGCAGTTATTAAAGTGGAAACTTTTCCCTACACAAGATATGGTTATCTC TATGGAAAAGTAAAAACTATTACTCTTGATGCTATTGAGCACCCTCAGCTTGGTTTAGTTTTCAATTCTATTATTGAGAT TAATAAGAAAACATTAACAGATGGTGATAAAGAAATTCAATTAGGTTCCGGAATGAGCGTTATTGCAGAAATTAAAACAG GAGAACGCAGTGTTATCAGTTTCCTACTCAGTCCATTAGAAGAATCTATTACTGAAAGTCTAAGAGAACGTTAA Protein sequence : MKLWILGLGEFFQRYRNIWREIWKIRKQLDTPARQKDENEFLPAHLELIETPISKKPRLIAYLIMLFLFLAIVISIISKV EIVASATGKLVFSGHSKEIKPIENALVKDIFVKDGQFVEKGQLLLNLTALGADADKQKTKVSLGLERLDGYRYKSLLYSI EHNRLPLLDFNQADFDSVQEEDKTNARHLITEQFETWQKQKYQKELAYQRKQAEKQTVLANIRKYESASRIEKEKLSDLK KLYDVKSISKHELLAQENRYVEASNELSVYQSHLKEVESDLLKAQEDLKLVTQLFKSDILEKLQQNIQREKQLTLELEKN EQRQLASIIRAPVSGTVQQLKTHTKGGVVTTAETLMVIAPEDDVLEVSALIQNKDIGFVEIGQEAVIKVETFPYTRYGYL YGKVKTITLDAIEHPQLGLVFNSIIEINKKTLTDGDKEIQLGSGMSVIAEIKTGERSVISFLLSPLEESITESLRER |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hlyD | CAD33761.1 | Hemolysin D | Virulence | PAI I 536 | Protein | 8e-141 | 63 |
| hlyD | CAD42037.1 | HlyD protein | Virulence | PAI II 536 | Protein | 4e-141 | 63 |
| hlyD | NP_755449.1 | hemolysin D | Virulence | PAI I CFT073 | Protein | 6e-141 | 63 |
| hlyD | AAC61717.1 | chromosomal hemolysin D | Virulence | PAI I CFT073 | Protein | 4e-126 | 63 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| apxIIID | YP_001652344.1 | RTX-III toxin determinant D | VFG1556 | Protein | 2e-141 | 63 |
| apxIIID | YP_001652344.1 | RTX-III toxin determinant D | VFG0908 | Protein | 3e-141 | 63 |
| apxIIID | YP_001652344.1 | RTX-III toxin determinant D | VFG1502 | Protein | 5e-141 | 63 |
| apxIIID | YP_001652344.1 | RTX-III toxin determinant D | VFG0843 | Protein | 4e-101 | 48 |
