Gene Information

Name : yfeC (APJL_0129)
Accession : YP_001651177.1
Strain : Actinobacillus pleuropneumoniae JL03
Genome accession: NC_010278
Putative virulence/resistance : Virulence
Product : iron (chelated) transport system membrane protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1108
EC number : -
Position : 144825 - 145679 bp
Length : 855 bp
Strand : -
Note : -

DNA sequence : 
ATGCTAGAACTACTACTCGAACCCTTCCAATATAACTATATGCAAAAAGCGATTTTCGTCAGTATGGGCGTTGGTGTGGT
TTGTGCCTTTCTCTCCGCCTTTTTAATGTTAAAAGGTTGGTCTTTAATCGGTGACGCCCTTTCACATGCCGTAGTGCCGG
GCGTTGCCATCGCTTATGCGTTAAAACTCCCTTATGCTTTCGGCGCATTTTTTTCCGGTATTCTCGCCGCTCTTGCTATT
TTATGGGTAAAAAGTATTACTCGAATAAAAGAAGATGCGGTTATCGGCTTTATCTTTACCACATTTTTTGCACTAGGCAT
GTTTATTGTATCGCTTAACCCAACCTCAGTTGATGTTAATGCGATTGTAATGGGCAACATCCTCGGCATTGCAGACGAAG
ATTTATGGCAAGTTGCGATCATTATCGGGTTATCGCTGCTTGGTCTTATCTTTTTCTGGAAAGATCTACTACTGACTTTT
TTTGATGAACATCATGCGTTGTCTGTAGGGCTCTCTCCTCTTCGCTACAAAATTTTATTCTTCACCTTATTAAGTGCTTG
TGTCGTGGTCGCATTGCAAACGGTCGGCGCAATTTTAGTAATTGCAATGGTTGTTACCCCGGGCGCAACAGCATACTTAC
TGACAGACAAATTCCCTCGTTTAGTTATTATCGCCATTCTTATCGGTAGCCTCAGCAGTGGCATCGGTGCCTATCTCAGT
TACTTTTTAAACGGTGCGACCGGCGGTGTGATTGTTTGCTTACAGACCTGTATCTTTTTATTGGCTTTTTGCTTTGCGCC
TAAATACGGTTTGATTAGCCAAAAACGTAAGCGTTTGGGGGCAATCAATGAATGA

Protein sequence : 
MLELLLEPFQYNYMQKAIFVSMGVGVVCAFLSAFLMLKGWSLIGDALSHAVVPGVAIAYALKLPYAFGAFFSGILAALAI
LWVKSITRIKEDAVIGFIFTTFFALGMFIVSLNPTSVDVNAIVMGNILGIADEDLWQVAIIIGLSLLGLIFFWKDLLLTF
FDEHHALSVGLSPLRYKILFFTLLSACVVVALQTVGAILVIAMVVTPGATAYLLTDKFPRLVIIAILIGSLSSGIGAYLS
YFLNGATGGVIVCLQTCIFLLAFCFAPKYGLISQKRKRLGAINE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitC NP_461784.1 permease Virulence SPI-1 Protein 9e-62 61
sitC NP_457257.1 Iron transport protein, inner membrane component Virulence SPI-1 Protein 7e-62 61
sitC NP_806466.1 iron transporter inner membrane protein Virulence SPI-1 Protein 7e-62 61
sitC AAD41067.1 SitC Virulence centisome 63 pathogenicity island Protein 7e-62 61
sitC YP_217783.1 iron transporter: fur regulated Virulence SPI-1 Protein 9e-62 61

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
yfeC YP_001651177.1 iron (chelated) transport system membrane protein BAC0441 Protein 4e-77 73
yfeC YP_001651177.1 iron (chelated) transport system membrane protein BAC0351 Protein 4e-62 61

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
yfeC YP_001651177.1 iron (chelated) transport system membrane protein VFG0527 Protein 4e-62 61