Gene Information

Name : BcerKBAB4_0233 (BcerKBAB4_0233)
Accession : YP_001643129.1
Strain : Bacillus weihenstephanensis KBAB4
Genome accession: NC_010184
Putative virulence/resistance : Unknown
Product : RNA-binding S1 domain-containing protein
Function : -
COG functional category : K : Transcription
COG ID : COG2183
EC number : -
Position : 243426 - 245594 bp
Length : 2169 bp
Strand : +
Note : PFAM: RNA binding S1 domain protein; SMART: Resolvase RNase H domain protein fold; KEGG: bce:BC0267 transcription accessory protein (S1 RNA binding domain)

DNA sequence :
ATGGAAATGGTAGATAATCGACAAGGGTTAATGAAAATGTTAGTGAAAGAATTAGGCTTTACAGAAAAGCAAGTTCGTCA
TGTTATTCAATTAACAGAAGAAGGTAACACAGTTCCATTTATCGCTCGTTACCGAAAAGAATGGACAGGGTCTCTTGATG
AGGTGCAAATTCGTGCAATCTTAGAAAGATGGCAATATATGATGCAACTAGAAGATAGGAAAGAAGAGGTTCTTCGTCTT
ATTGGTGAAAAGGGTAAACTAACCGAAGAGTTGCGTCGTCATATTGTTGCTGCAACAAAACTTCAAGAAGTAGAAGACTT
ATATCGTCCATATAAAGAAAAAAGAAGAACGAAAGCTACAATTGCTAAAGAAAAGGGATTAGAACCGTTAGCTGAGTGGC
TATTATTATATAAAAAAGAAAATCCAGCAGAGAAGGCTATGGAATTTGTTAATGCAGAAAAGGAAGTGGCGTCTGCAGAA
GATGCGTTGCAAGGTGCGCAAGATATTATTGCGGAACTTGTTTCGGATAATGCGGCATATCGTAGTTGGATTCGCAATAC
TACTTTCCGAAAAGGGATTATGTCTTCATCTGTAAAAGATAAAGAAAAAGATGAAAAGAATATATATGAAATGTATTATG
GCTATGAAGAACCGTTGCAAAAAGTAGTGCCGCATCGTGTACTAGCTATGAATCGTGGTGAAAAGGAAGACGTATTAAGA
GTTTCTGTTATCACGCCAATTGAAGAAATTCTTCAGTTTTTACATAAAAAAATGATTCTTGATGAAGCTTCTAAAAGTGC
GCATTATGTACAATTAGCGATGGAAGATGGATATAAGCGATTAATTCAACCTTCAATAGAAAGAGAAATTCGTAAAGAAT
TAATGGAAACGGCCGAAGAACAAGCGATTCATATTTTCTCTGAGAATTTACGTAATTTATTATTACAACCTCCGATGAAA
GGGAAAGTTGTGTTAGCGGTAGATCCAGCATATAGAACCGGTTGTAAATTAGCTGTAGTAGATGATACAGGAAAAGTTCT
TCACATAGATGTTATTTATCCGCATCCGCCTGCTCGTAAATATGAGGATGCAAAAACGAAAATCATTTCAATTATAGATA
AATATGAAGTTGAAATGATAGCGATTGGAAATGGTACAGCTTCGAGGGAAACGGAAGAATTTATAGTAGATGTATTACAA
AATGTAGAGCGAGATGTATTTTACATTATTGTAAATGAAGCGGGTGCTAGTGTGTACTCAGCATCTGATGTAGCTCGCGA
GGAGTTTCCAAATTTACAGGTTGAAGAAAGAAGTGCTGTTTCAATTGGGAGACGTCTACAAGATCCACTTGCAGAGCTTG
TGAAAATTGACCCTAAATCTGTTGGGGTGGGACAATATCAACATGATGTATCTCAAAAGCGATTAAATGAATCATTAACA
TTTGTAGTAGAGACGGCAGTTAACCGAGTTGGTGTTAATGTAAATACAGCTTCAGTTGCATTGTTGCAATATGTTTCGGG
GTTATCAAAAACAGTTGCGAAAAATATTGTAGCTAAGCGTGAGGAAGATGGGAAATTCACGAAGCGTACTGAGTTAAAGA
AAATCCCACGTTTAGGTGCAAAAACATATGAACAATGTATCGGGTTTTTACGTATATTAGAAGGAGCGAATCCGTTAGAT
CGCACAGGGATTCATCCGGAACAATATAAAAATGTTGAATTGCTATTGAAGAGCTTAGGGTTATCAAAGAATGATGTGGG
GAAACCAAACTTGCAAAAGAGTTTCGAAGGAGTAGATATTTCTAAATTATCTCAAGAGACGGAGATTGGTGAGCCGACAT
TAGTTGATATTATGGATGCTTTAATTAGCCCGGAGCGAGATATGAGGGATGAGTTGCCAAAGCCACTTTTGAAAAAGGGG
ATTTTAAAATTAGAAGATTTAAAGCGTGGTATGGAATTAGAGGGAACGATCCGCAATGTTGTTGATTTCGGTGCCTTTGT
TGATATTGGTGTGAAGCAAGATGGTTTAGTGCATATTTCTAAACTAAGCAAACAATTTGTAAAGCATCCATTAGATATTG
TATCCGTGGGACAAATTGTAAAGGTATGGGTAGATGATATTGATACGAAAAAAGGTCGTGTTGCATTATCAATGTTACCG
ATTGAATAG

Protein sequence :
MEMVDNRQGLMKMLVKELGFTEKQVRHVIQLTEEGNTVPFIARYRKEWTGSLDEVQIRAILERWQYMMQLEDRKEEVLRL
IGEKGKLTEELRRHIVAATKLQEVEDLYRPYKEKRRTKATIAKEKGLEPLAEWLLLYKKENPAEKAMEFVNAEKEVASAE
DALQGAQDIIAELVSDNAAYRSWIRNTTFRKGIMSSSVKDKEKDEKNIYEMYYGYEEPLQKVVPHRVLAMNRGEKEDVLR
VSVITPIEEILQFLHKKMILDEASKSAHYVQLAMEDGYKRLIQPSIEREIRKELMETAEEQAIHIFSENLRNLLLQPPMK
GKVVLAVDPAYRTGCKLAVVDDTGKVLHIDVIYPHPPARKYEDAKTKIISIIDKYEVEMIAIGNGTASRETEEFIVDVLQ
NVERDVFYIIVNEAGASVYSASDVAREEFPNLQVEERSAVSIGRRLQDPLAELVKIDPKSVGVGQYQHDVSQKRLNESLT
FVVETAVNRVGVNVNTASVALLQYVSGLSKTVAKNIVAKREEDGKFTKRTELKKIPRLGAKTYEQCIGFLRILEGANPLD
RTGIHPEQYKNVELLLKSLGLSKNDVGKPNLQKSFEGVDISKLSQETEIGEPTLVDIMDALISPERDMRDELPKPLLKKG
ILKLEDLKRGMELEGTIRNVVDFGAFVDIGVKQDGLVHISKLSKQFVKHPLDIVSVGQIVKVWVDDIDTKKGRVALSMLP
IE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
NMB0075 NP_273139.1 transcriptional accessory protein Tex Not tested IHT-A Protein 3e-127 44