Gene Information

Name : Caur_3854 (Caur_3854)
Accession : YP_001637420.1
Strain : Chloroflexus aurantiacus J-10-fl
Genome accession: NC_010175
Putative virulence/resistance : Virulence
Product : response regulator receiver
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 5144324 - 5145016 bp
Length : 693 bp
Strand : +
Note : PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: rca:Rcas_0960 two component transcriptional regulator, winged helix family

DNA sequence : 
ATGCGTCAGACGATCTTGATTATCGATGATCATCTCAATGTACGCACTATGATTGCCGACTACTTGCAAGAGATTGGATA
TCGCGTCGTTACAGCAAGCGACGGCGCGGAGGGCCTCATTATTGCCCGCCGCGTTCGTCCCGACCTGGTCTTGCTCGATA
TCATGATGCCCAAACTGGATGGCTTTGGTTTCTTACAGGCGTATCGCCGGGAACATCAGGCACCGGTCATCTTATTGACT
GCGCGAATTGATGAAACGGACAAGGTAGTCGGATTGGAACTGGGAGCCGACGATTATGTGACCAAACCCTTCAGCCTGAA
AGAATTGGTGGCACGAATCAGGGCAGTCTTGCGTCGAACAGCCGCAGCACGGCAACCGAATGAAGAACAGCCGTTGCGCA
TTGGCAACCTTGAACTGAATCGTGCAACCCGCATGGTAACGGTTGACGAACGGCCCATATACCTGACACCATCTGAGTTT
GCGTTACTGGCGTTGCTCATGGCTTCACCGGGACGTGTGTACACTCGCGAGCAACTCCTTGAACACCTCCAGGGCAACAG
TTATGAAGGGGTTGAACGAACGATTGACGTACACATTCGCAATCTACGCCGCAAAATCGAGCCGGATCCCACCAATCCAA
CCTACATCGAAACTGTCTTCGGCATCGGGTACCGCTGCCGTCCACTGAGTTAA

Protein sequence : 
MRQTILIIDDHLNVRTMIADYLQEIGYRVVTASDGAEGLIIARRVRPDLVLLDIMMPKLDGFGFLQAYRREHQAPVILLT
ARIDETDKVVGLELGADDYVTKPFSLKELVARIRAVLRRTAAARQPNEEQPLRIGNLELNRATRMVTVDERPIYLTPSEF
ALLALLMASPGRVYTREQLLEHLQGNSYEGVERTIDVHIRNLRRKIEPDPTNPTYIETVFGIGYRCRPLS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 6e-31 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Caur_3854 YP_001637420.1 response regulator receiver AF155139.2.orf0.gene Protein 1e-40 43
Caur_3854 YP_001637420.1 response regulator receiver NC_012469.1.7685629. Protein 1e-34 43
Caur_3854 YP_001637420.1 response regulator receiver CP001918.1.gene5135. Protein 3e-29 43
Caur_3854 YP_001637420.1 response regulator receiver CP000675.2.gene1535. Protein 1e-39 42
Caur_3854 YP_001637420.1 response regulator receiver NC_002952.2859905.p0 Protein 2e-36 42
Caur_3854 YP_001637420.1 response regulator receiver NC_002758.1121668.p0 Protein 2e-36 42
Caur_3854 YP_001637420.1 response regulator receiver NC_009641.5332272.p0 Protein 2e-36 42
Caur_3854 YP_001637420.1 response regulator receiver NC_013450.8614421.p0 Protein 2e-36 42
Caur_3854 YP_001637420.1 response regulator receiver NC_007793.3914279.p0 Protein 2e-36 42
Caur_3854 YP_001637420.1 response regulator receiver NC_003923.1003749.p0 Protein 2e-36 42
Caur_3854 YP_001637420.1 response regulator receiver NC_002745.1124361.p0 Protein 2e-36 42
Caur_3854 YP_001637420.1 response regulator receiver AE016830.1.gene1681. Protein 2e-38 42
Caur_3854 YP_001637420.1 response regulator receiver NC_009782.5559369.p0 Protein 2e-36 42
Caur_3854 YP_001637420.1 response regulator receiver NC_002951.3237708.p0 Protein 2e-36 42
Caur_3854 YP_001637420.1 response regulator receiver NC_007622.3794472.p0 Protein 2e-36 42
Caur_3854 YP_001637420.1 response regulator receiver BAC0197 Protein 1e-32 42
Caur_3854 YP_001637420.1 response regulator receiver CP000034.1.gene3834. Protein 1e-32 41
Caur_3854 YP_001637420.1 response regulator receiver CP004022.1.gene3215. Protein 6e-37 41
Caur_3854 YP_001637420.1 response regulator receiver CP001138.1.gene4273. Protein 1e-32 41
Caur_3854 YP_001637420.1 response regulator receiver NC_002695.1.915041.p Protein 1e-32 41
Caur_3854 YP_001637420.1 response regulator receiver HE999704.1.gene1528. Protein 1e-25 41
Caur_3854 YP_001637420.1 response regulator receiver AE000516.2.gene3505. Protein 7e-35 41
Caur_3854 YP_001637420.1 response regulator receiver HE999704.1.gene2815. Protein 5e-38 41
Caur_3854 YP_001637420.1 response regulator receiver BAC0039 Protein 3e-40 41
Caur_3854 YP_001637420.1 response regulator receiver CP000034.1.gene2186. Protein 3e-40 41
Caur_3854 YP_001637420.1 response regulator receiver NC_002695.1.916589.p Protein 2e-40 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Caur_3854 YP_001637420.1 response regulator receiver VFG1390 Protein 3e-35 43
Caur_3854 YP_001637420.1 response regulator receiver VFG0596 Protein 2e-31 42
Caur_3854 YP_001637420.1 response regulator receiver VFG1389 Protein 1e-29 42
Caur_3854 YP_001637420.1 response regulator receiver VFG0473 Protein 2e-21 42