Gene Information

Name : Caur_3391 (Caur_3391)
Accession : YP_001636965.1
Strain : Chloroflexus aurantiacus J-10-fl
Genome accession: NC_010175
Putative virulence/resistance : Virulence
Product : response regulator receiver
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 4543750 - 4544454 bp
Length : 705 bp
Strand : +
Note : PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: rca:Rcas_0353 two component transcriptional regulator, winged helix family

DNA sequence : 
ATGGAAGCAGCTACAATTCTCGTTGTTGATGACGAGCAACCAATTGTTGATCTGGTCAGCAGTTACCTGACAAACGAGGG
TTTTGTTGTGCATCGGGCTTACGATGGCCCTGGCGCGTTGGCGCTGGCGCGGAGTGTGAAGCCCGATCTGGTTGTTCTTG
ATGTGATGCTGCCGGGGCTGGACGGGATTGAGGTTTGTCGGCAGTTGCACCGCGACACCTCGGTGTTTGTACTGATGCTG
ACGGCACGCGCCGATGAGATTGATAAGCTGATCGGTTTGTCGGTCGGTGCTGATGATTATCTGACCAAGCCATTCAGTCC
GCGTGAGTTGGTCGCACGGGTGAAGGCTATTCTCCGCCGTAATCGGGTTATTCGTGCGATAGAGGTGAACCAGCGCCCGA
TTTTGCAATTTGAAGGGCTGTTGATCGACCCCGAACGGCGCGAAGTTGAACGCAACGGGGTGCGGGTTGATTTGACCCCG
CGTGAATTTGATCTGCTCTATGCACTGGCCAGCTATCCGGGGCGCGTGTTCACCCGTGAAGAGTTGCTTCAGCGTGTGTG
GGGGCCAGATTTTGCCGGTATTGATTGGGTGGTTGACGTGCATATCGGTACTCTGCGGCGCAAGCTCGATGATGATCATC
ACGGCACGCCTCTGGTGCAGACGGTTCGTGGCGTTGGTTATAAGTTTGTTGGTAGTACGCGATGA

Protein sequence : 
MEAATILVVDDEQPIVDLVSSYLTNEGFVVHRAYDGPGALALARSVKPDLVVLDVMLPGLDGIEVCRQLHRDTSVFVLML
TARADEIDKLIGLSVGADDYLTKPFSPRELVARVKAILRRNRVIRAIEVNQRPILQFEGLLIDPERREVERNGVRVDLTP
REFDLLYALASYPGRVFTREELLQRVWGPDFAGIDWVVDVHIGTLRRKLDDDHHGTPLVQTVRGVGYKFVGSTR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 6e-27 42
unnamed CAD42044.1 hypothetical protein Not tested PAI II 536 Protein 7e-34 41
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 3e-26 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Caur_3391 YP_001636965.1 response regulator receiver HE999704.1.gene2815. Protein 2e-43 49
Caur_3391 YP_001636965.1 response regulator receiver NC_002952.2859905.p0 Protein 6e-46 48
Caur_3391 YP_001636965.1 response regulator receiver NC_002758.1121668.p0 Protein 4e-46 48
Caur_3391 YP_001636965.1 response regulator receiver NC_009641.5332272.p0 Protein 4e-46 48
Caur_3391 YP_001636965.1 response regulator receiver NC_013450.8614421.p0 Protein 4e-46 48
Caur_3391 YP_001636965.1 response regulator receiver NC_007793.3914279.p0 Protein 4e-46 48
Caur_3391 YP_001636965.1 response regulator receiver NC_007622.3794472.p0 Protein 5e-46 48
Caur_3391 YP_001636965.1 response regulator receiver NC_002745.1124361.p0 Protein 4e-46 48
Caur_3391 YP_001636965.1 response regulator receiver NC_009782.5559369.p0 Protein 4e-46 48
Caur_3391 YP_001636965.1 response regulator receiver NC_002951.3237708.p0 Protein 4e-46 48
Caur_3391 YP_001636965.1 response regulator receiver NC_003923.1003749.p0 Protein 4e-46 48
Caur_3391 YP_001636965.1 response regulator receiver AE000516.2.gene3505. Protein 8e-37 48
Caur_3391 YP_001636965.1 response regulator receiver NC_012469.1.7685629. Protein 9e-42 47
Caur_3391 YP_001636965.1 response regulator receiver NC_012469.1.7686381. Protein 2e-43 45
Caur_3391 YP_001636965.1 response regulator receiver CP000675.2.gene1535. Protein 4e-41 44
Caur_3391 YP_001636965.1 response regulator receiver AF155139.2.orf0.gene Protein 3e-45 44
Caur_3391 YP_001636965.1 response regulator receiver CP004022.1.gene3215. Protein 5e-36 44
Caur_3391 YP_001636965.1 response regulator receiver CP001918.1.gene5135. Protein 6e-29 44
Caur_3391 YP_001636965.1 response regulator receiver NC_002695.1.915041.p Protein 2e-32 43
Caur_3391 YP_001636965.1 response regulator receiver CP000034.1.gene3834. Protein 2e-32 43
Caur_3391 YP_001636965.1 response regulator receiver FJ349556.1.orf0.gene Protein 4e-44 43
Caur_3391 YP_001636965.1 response regulator receiver AE016830.1.gene1681. Protein 2e-40 43
Caur_3391 YP_001636965.1 response regulator receiver AF162694.1.orf4.gene Protein 1e-34 43
Caur_3391 YP_001636965.1 response regulator receiver NC_007793.3914065.p0 Protein 3e-34 42
Caur_3391 YP_001636965.1 response regulator receiver NC_002758.1121390.p0 Protein 3e-34 42
Caur_3391 YP_001636965.1 response regulator receiver NC_010079.5776364.p0 Protein 3e-34 42
Caur_3391 YP_001636965.1 response regulator receiver NC_002952.2859858.p0 Protein 3e-34 42
Caur_3391 YP_001636965.1 response regulator receiver NC_007622.3794948.p0 Protein 3e-34 42
Caur_3391 YP_001636965.1 response regulator receiver NC_003923.1003417.p0 Protein 3e-34 42
Caur_3391 YP_001636965.1 response regulator receiver NC_013450.8614146.p0 Protein 3e-34 42
Caur_3391 YP_001636965.1 response regulator receiver NC_002951.3238224.p0 Protein 3e-34 42
Caur_3391 YP_001636965.1 response regulator receiver CP000647.1.gene4257. Protein 5e-32 42
Caur_3391 YP_001636965.1 response regulator receiver CP001138.1.gene4273. Protein 8e-32 42
Caur_3391 YP_001636965.1 response regulator receiver BAC0533 Protein 5e-32 42
Caur_3391 YP_001636965.1 response regulator receiver AF130997.1.orf0.gene Protein 3e-35 42
Caur_3391 YP_001636965.1 response regulator receiver AM180355.1.gene1830. Protein 1e-38 42
Caur_3391 YP_001636965.1 response regulator receiver DQ212986.1.gene4.p01 Protein 2e-38 42
Caur_3391 YP_001636965.1 response regulator receiver BAC0197 Protein 5e-27 42
Caur_3391 YP_001636965.1 response regulator receiver CP001485.1.gene721.p Protein 7e-33 41
Caur_3391 YP_001636965.1 response regulator receiver CP000647.1.gene2531. Protein 2e-37 41
Caur_3391 YP_001636965.1 response regulator receiver BAC0039 Protein 2e-37 41
Caur_3391 YP_001636965.1 response regulator receiver BAC0596 Protein 2e-37 41
Caur_3391 YP_001636965.1 response regulator receiver CP001918.1.gene3444. Protein 1e-37 41
Caur_3391 YP_001636965.1 response regulator receiver CP000034.1.gene2186. Protein 2e-37 41
Caur_3391 YP_001636965.1 response regulator receiver CP001138.1.gene2239. Protein 2e-37 41
Caur_3391 YP_001636965.1 response regulator receiver NC_002695.1.916589.p Protein 1e-37 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Caur_3391 YP_001636965.1 response regulator receiver VFG1389 Protein 2e-28 48
Caur_3391 YP_001636965.1 response regulator receiver VFG1390 Protein 2e-36 44
Caur_3391 YP_001636965.1 response regulator receiver VFG1386 Protein 1e-30 44
Caur_3391 YP_001636965.1 response regulator receiver VFG0596 Protein 2e-27 42
Caur_3391 YP_001636965.1 response regulator receiver VFG1563 Protein 4e-34 41