Gene Information

Name : Caur_3262 (Caur_3262)
Accession : YP_001636839.1
Strain : Chloroflexus aurantiacus J-10-fl
Genome accession: NC_010175
Putative virulence/resistance : Unknown
Product : short-chain dehydrogenase/reductase SDR
Function : -
COG functional category : I : Lipid transport and metabolism
COG ID : COG1028
EC number : -
Position : 4374362 - 4375102 bp
Length : 741 bp
Strand : -
Note : PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: rrs:RoseRS_4552 short-chain dehydrogenase/reductase SDR

DNA sequence : 
ATGCGTCTCAGTGGCAAAGTAGCCCTGATTACCGGTGCTGGTCAGGGGATTGGACGGGCAACCGCCCTGTTGTTTGGTCA
GCACGGCGCCAAAGTTGCCGTTGCCGATATTAATGAGGAAGCAGCCCAGGCAACAGCTCAGGCGATTGTGGATGCTGGCG
GTGAAGCCAAAGCGTTTTTCATGAACGTAGGCCAGGCCGCCTCGGTGGAAGCTGCGGTAAAAGCAGTTGTTGAATGGGCG
GGTAGAATTGACGTATTGGTGAACAATGCCGGCATTACACGCGATGCCCGGATGATCAAGATGACTGAAGAGCAATTTGA
TGCCGTGATCAATGTCAATCTGAAAGGCGTCTGGCTCTGCACCAAATATGTGGCTCCAATCATGATCGAGCAGGGCGGCG
GCTCTATTATTAATGCAGCTTCTATCGTGGCGTTTGAAGGTAATTTCGGTCAGACCAATTATGTCGCTACCAAAGCTGGC
GTGATTGGAATGACCAAGACCTGGGCCCGCGAATTTGGGCCAAGTGGCATCCGCGTCAATGCCGTTGCCCCTGGCTTCAC
CCAAACTGAGATGATTGCTCACGTGCCGGAAAAGGTGCTTGAGGAGTTCAAAGGCCGTACACCGCTACGCCGGTTAGGTA
CTGCCGAGGATATGGCCTACGCCTATCTTTTCCTTGCATCTGATGAGGCGAGCTTTATCACCGGTGAGGTGTTACCGGTT
GATGGAGGTCTGACTCTTTAA

Protein sequence : 
MRLSGKVALITGAGQGIGRATALLFGQHGAKVAVADINEEAAQATAQAIVDAGGEAKAFFMNVGQAASVEAAVKAVVEWA
GRIDVLVNNAGITRDARMIKMTEEQFDAVINVNLKGVWLCTKYVAPIMIEQGGGSIINAASIVAFEGNFGQTNYVATKAG
VIGMTKTWAREFGPSGIRVNAVAPGFTQTEMIAHVPEKVLEEFKGRTPLRRLGTAEDMAYAYLFLASDEASFITGEVLPV
DGGLTL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAT96098.1 putative short-chain type regulator dehydrogenase Not tested T-PAI Protein 3e-33 45
unnamed AAT96175.1 putative short-chain type regulator Not tested T-PAI Protein 2e-33 45
unnamed AAT96227.1 putative short-chain type regulator Not tested T-PAI Protein 1e-33 45
unnamed AAT96054.1 putative short-chain type regulator Not tested T-PAI Protein 1e-33 45
unnamed AAT96115.1 putative short-chain type regulator Not tested T-PAI Protein 5e-34 44