Gene Information

Name : Caur_0196 (Caur_0196)
Accession : YP_001633838.1
Strain : Chloroflexus aurantiacus J-10-fl
Genome accession: NC_010175
Putative virulence/resistance : Virulence
Product : ABC transporter-like protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1121
EC number : -
Position : 249226 - 250002 bp
Length : 777 bp
Strand : -
Note : PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rrs:RoseRS_3069 ABC transporter related

DNA sequence :
ATGGAAGTTGCAGTTGACATCAAAGATTTGACCGTTGCCTACGGTGATAAACCGGTTTTATGGGACGTTGATCTTCAGGT
TCCCCGTGGCGTGTTGATGGCGATTGTCGGCCCCAATGGTGCCGGCAAGACGACGCTCCTCAAAGCCATGCTAGGGCTGG
TCAGACCAGCAGCGGGAAGTGTGCGTGTATTTGGCCGGCCATACCACCAGCAACGGCATCTGATCGCTTACGTGCCGCAA
CGCAGCAGCGTTGATTGGGACTTTCCGACGACAGTGCTTGATGTGGTGTTGATGGGACGCTACGGACATCTCGGCTGGTT
CCGTCGTCCGGGCCGGGCTGAGCGGGACGCGGCGCTGGCCGCCCTTGCCCAGGTCCAGATGGCCGATTTCGCCCATCGCC
AGATCGGTCAGCTTTCGGGTGGTCAACAGCAGCGTGTCTTCCTGGCCCGTGCGCTGGCACAGGCGGCTGAAATCTACGTG
ATGGATGAACCGTTTCAAGGCGTTGATGCCGTGACCGAGCGCGCCATCATCAACGTTTTACGCGACCTGCGAGCTGCCGG
CAAGACGGTTGTCGTCGTGCACCACGATTTGCAGACCGTGACCGAGTATTTCGATCACGTTGCGCTCATTAACGTGCGGC
GAATTGCTGCCGGCCCGGTTGCCGAGGTCTTTACCGAGGCGAATCTGCGGGCAACGTATGGTGGTCGTCTCGCCCTGTTG
CATACACCCACCGACACTGCACCCGCTGCCCGGCCAACCCCGGCACCAGGCGATTGA

Protein sequence :
MEVAVDIKDLTVAYGDKPVLWDVDLQVPRGVLMAIVGPNGAGKTTLLKAMLGLVRPAAGSVRVFGRPYHQQRHLIAYVPQ
RSSVDWDFPTTVLDVVLMGRYGHLGWFRRPGRAERDAALAALAQVQMADFAHRQIGQLSGGQQQRVFLARALAQAAEIYV
MDEPFQGVDAVTERAIINVLRDLRAAGKTVVVVHHDLQTVTEYFDHVALINVRRIAAGPVAEVFTEANLRATYGGRLALL
HTPTDTAPAARPTPAPGD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitB NP_457256.1 Iron transport protein, ATP-binding component Virulence SPI-1 Protein 2e-52 48
sitB NP_806465.1 iron ABC transporter ATP-binding protein Virulence SPI-1 Protein 2e-52 48
sitB YP_217782.1 iron transporter: fur regulated Virulence SPI-1 Protein 2e-52 47
sitB NP_461783.1 ATP-binding protein Virulence SPI-1 Protein 1e-52 47
sitB AAD41066.1 SitB Virulence centisome 63 pathogenicity island Protein 1e-52 47
EF0575 NP_814340.1 cationic ABC transporter ATP-binding protein Not tested Not named Protein 4e-47 46
ef0093 AAM75296.1 EF0093 Not tested Not named Protein 3e-47 46

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Caur_0196 YP_001633838.1 ABC transporter-like protein BAC0400 Protein 2e-73 64
Caur_0196 YP_001633838.1 ABC transporter-like protein BAC0350 Protein 6e-53 47
Caur_0196 YP_001633838.1 ABC transporter-like protein BAC0440 Protein 2e-48 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Caur_0196 YP_001633838.1 ABC transporter-like protein VFG0526 Protein 5e-53 47