Gene Information

Name : Mext_0815 (Mext_0815)
Accession : YP_001638291.1
Strain : Methylobacterium extorquens PA1
Genome accession: NC_010172
Putative virulence/resistance : Virulence
Product : ABC transporter-like protein
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG1134
EC number : -
Position : 886927 - 887580 bp
Length : 654 bp
Strand : +
Note : PFAM: ABC transporter related; KEGG: xau:Xaut_3811 ABC transporter related

DNA sequence : 
GTGATCCGCTTCGAGAACGTCACCAAGGTCTATTCCACCTATGGTCGGCGGCGCACCATCCTCGACCGGGTGAACTTCAC
CCTGAAGCCTGGCATCAGCTACGGCATCATGGGGATCAACGGCGCCGGCAAATCGACCACCATGAAGCTCATCGCCGGCG
TCGAGGAGCCGACCCGCGGCCGCATCGTCCGGGGTCTTCGCGTCTCCTGGCCGCTCGGCTTCGCAGGCGGCTTCAACGCC
AAGATGACCGGTCGCGACAACGTCATCTTCGTCGCCCGGATCTACGGGGAGGATCCACGGCGCGTGCTCGAATTCGTCGA
GGATTTCTCCGAACTCGGCAGCTACCTGAACATGCCGGTCAACACCTACTCGTCCGGCATGGGCTCACGCCTTGCCTTCG
GGATGAGCATGGCGATTCCCTTCGACACCTACCTCATCGACGAAACGCTCTCGGTGGGCGACGCGCGCTTCCAGAAGCGG
TGCGCCGAGGTGTTCAACAAGCGGCGCGAGACCGCGGACGTGATCCTGATCTCCCACAGCATGGAACAGATCCGCGAATA
TTGCAGTCAGGCGCTGATCCTGATCAACGGGCAGGCGGTGGTCTATGACGATGTCGATGAGGCGATCACGGCCTACCGGC
GCCTGAATAGCTGA

Protein sequence : 
MIRFENVTKVYSTYGRRRTILDRVNFTLKPGISYGIMGINGAGKSTTMKLIAGVEEPTRGRIVRGLRVSWPLGFAGGFNA
KMTGRDNVIFVARIYGEDPRRVLEFVEDFSELGSYLNMPVNTYSSGMGSRLAFGMSMAIPFDTYLIDETLSVGDARFQKR
CAEVFNKRRETADVILISHSMEQIREYCSQALILINGQAVVYDDVDEAITAYRRLNS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ctrD NP_273138.1 capsule polysaccharide export ATP-binding protein CtrD Not tested IHT-A Protein 4e-48 48
kpsT YP_854396.1 polysialic acid transport ATP-binding protein KpsT Not tested PAI I APEC-O1 Protein 7e-50 48
kpsT CAE85223.1 KpsT protein Virulence PAI V 536 Protein 1e-46 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Mext_0815 YP_001638291.1 ABC transporter-like protein VFG0258 Protein 1e-48 48
Mext_0815 YP_001638291.1 ABC transporter-like protein VFG1449 Protein 2e-50 48
Mext_0815 YP_001638291.1 ABC transporter-like protein VFG0696 Protein 3e-49 48
Mext_0815 YP_001638291.1 ABC transporter-like protein VFG2563 Protein 1e-44 47